clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF029B06 | Sequence | 694 | 006622 (8) | ref|XP_009800540.1| | 2e-49 | PREDICTED: dnaJ homolog subfamily B member 6 isoform X1 [Nicotiana sylvestris] | 685 | 006622 (8) | emb|CDO97811.1| | 5e-30 | unnamed protein product [Coffea canephora] |
JMSF037A02 | Sequence | 700 | 006622 (8) | ref|XP_009800540.1| | 3e-49 | PREDICTED: dnaJ homolog subfamily B member 6 isoform X1 [Nicotiana sylvestris] | 647 | 006622 (8) | emb|CDO97811.1| | 5e-25 | unnamed protein product [Coffea canephora] |
JMSF040I10 | Sequence | 695 | 006622 (8) | ref|XP_009800540.1| | 2e-49 | PREDICTED: dnaJ homolog subfamily B member 6 isoform X1 [Nicotiana sylvestris] | 819 | 006622 (8) | emb|CDO97811.1| | 2e-52 | unnamed protein product [Coffea canephora] |
JMSF046I01 | Sequence | 721 | 006622 (8) | emb|CDO97811.1| | 2e-49 | unnamed protein product [Coffea canephora] | 692 | 006622 (8) | emb|CDO97811.1| | 4e-27 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006622============================================1037 11 -------------------------------------------------------------------->JMSF046I01 <------------------------------------------------------------------rJMSF046I01 20 ------------------------------------------------------------------>JMSF029B06 <-----------------------------------------------------------------rJMSF029B06 20 ------------------------------------------------------------------>JMSF040I10 <------------------------------------------------------------------------------rJMSF040I10 45 ------------------------------------------------------------------->JMSF037A02 <-----------------------------------------------------------rJMSF037A02
The following clones don't have the opposite end in this pair.