| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF003I24 | Sequence | 579 | 011466 (26) | dbj|BAA77508.1| | 3e-88 | F1-ATP synthase delta subunit [Ipomoea batatas] | 689 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 6e-88 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF004H18 | Sequence | 590 | 011466 (26) | dbj|BAA77508.1| | 7e-108 | F1-ATP synthase delta subunit [Ipomoea batatas] | 782 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 6e-110 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF009F08 | Sequence | 578 | 011466 (26) | dbj|BAA77508.1| | 5e-106 | F1-ATP synthase delta subunit [Ipomoea batatas] | 654 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 2e-84 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF026P02 | Sequence | 534 | 011466 (26) | dbj|BAA77508.1| | 1e-93 | F1-ATP synthase delta subunit [Ipomoea batatas] | 746 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 1e-139 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF049F16 | Sequence | 619 | 011466 (26) | dbj|BAA77508.1| | 1e-105 | F1-ATP synthase delta subunit [Ipomoea batatas] | 612 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 2e-85 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF049P14 | Sequence | 616 | 011466 (26) | dbj|BAA77508.1| | 2e-109 | F1-ATP synthase delta subunit [Ipomoea batatas] | 603 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 1e-52 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFF051C05 | Sequence | 649 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 4e-113 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s | 596 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 8e-83 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMFN032G20 | Sequence | 614 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 8e-138 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s | |||||
| JMFN034E11 | Sequence | 496 | 011466 (26) | dbj|BAA77508.1| | 6e-30 | F1-ATP synthase delta subunit [Ipomoea batatas] | |||||
| JMFN045P09 | Sequence | 632 | 011466 (26) | dbj|BAA77508.1| | 4e-101 | F1-ATP synthase delta subunit [Ipomoea batatas] | |||||
| JMFN045P13 | Sequence | 570 | 011466 (26) | dbj|BAA77508.1| | 9e-80 | F1-ATP synthase delta subunit [Ipomoea batatas] | |||||
| JMSF009B08 | Sequence | 228 | 011466 (26) | dbj|BAA77509.1| | 2e-07 | F1-ATP synthase delta subunit [Ipomoea batatas] | 629 | 011466 (26) | dbj|BAA77508.1| | 1e-70 | F1-ATP synthase delta subunit [Ipomoea batatas] |
| JMSF035L01 | Sequence | 681 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 8e-121 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s | 713 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 6e-138 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMSF040P08 | Sequence | 651 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 4e-123 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s | 861 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 7e-138 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
| JMSF044B15 | Sequence | 634 | 011466 (26) | dbj|BAA77508.1| | 2e-109 | F1-ATP synthase delta subunit [Ipomoea batatas] | 683 | 011466 (26) | sp|P22778.1|ATPO_IPOBA | 6e-132 | RecName: Full=ATP synthase subunit O, mitochondrial; AltName: Full=Oligomycin s |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig011466============================================1203 47 ----------------------------------------------->JMFF003I24 <--------------------------------------------------------rJMFF003I24 83 -------------------------------------------------->JMFF049P14 <------------------------------------------------rJMFF049P14 100 ------------------------------------------------>JMFF004H18 <----------------------------------------------------------------rJMFF004H18 120 ----------------------------------------------->JMFF009F08 <------------------------------------------------------rJMFF009F08 120 ----------------------------------------------------->JMSF040P08 <-----------------------------------------------------------------------rJMSF040P08 143 -------------------------------------------------->JMFF049F16 <-----------------------------------------------rJMFF049F16 170 ------------------>JMSF009B08 <---------------------------------------------------rJMSF009B08 208 -------------------------------------------------->JMFF051C05 <-----------------------------------------------rJMFF051C05 231 -------------------------------------------------------->JMSF035L01 <----------------------------------------------------------rJMSF035L01 232 ---------------------------------------------------->JMSF044B15 <--------------------------------------------------------rJMSF044B15 241 ------------------------------------------->JMFF026P02 <-------------------------------------------------------------rJMFF026P02
The following clones don't have the opposite end in this pair.
---------------------------------------------->JMFN045P13- ------------------------------------------------->JMFN045P09- --------------------------------------->JMFN034E11- -------------------------------------------------->JMFN032G20-