| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF008J16 | Sequence | 757 | 010165 (12) | ref|XP_009623350.1| | 3e-92 | PREDICTED: protein SEC13 homolog [Nicotiana tomentosiformis] | |||||
| JMFF008K23 | Sequence | 614 | 010165 (12) | emb|CDP02169.1| | 2e-84 | unnamed protein product [Coffea canephora] | 775 | 010165 (12) | dbj|BAO49718.1| | 1e-111 | nuclear pore complex protein Sec13d [Nicotiana benthamiana] |
| JMFF019K20 | Sequence | 580 | 010165 (12) | emb|CDP02169.1| | 3e-83 | unnamed protein product [Coffea canephora] | 744 | 010165 (12) | ref|XP_009623350.1| | 1e-90 | PREDICTED: protein SEC13 homolog [Nicotiana tomentosiformis] |
| JMFF020I17 | Sequence | 601 | 010165 (12) | emb|CDP02169.1| | 3e-83 | unnamed protein product [Coffea canephora] | 740 | 010165 (12) | dbj|BAO49718.1| | 5e-107 | nuclear pore complex protein Sec13d [Nicotiana benthamiana] |
| JMFF038C04 | Sequence | 592 | 010165 (12) | emb|CDP02169.1| | 2e-86 | unnamed protein product [Coffea canephora] | 673 | 010165 (12) | ref|XP_009623350.1| | 5e-93 | PREDICTED: protein SEC13 homolog [Nicotiana tomentosiformis] |
| JMFF043O20 | Sequence | 646 | 010165 (12) | emb|CDP02169.1| | 4e-99 | unnamed protein product [Coffea canephora] | |||||
| JMFN003D10 | Sequence | 642 | 010165 (12) | emb|CDP02169.1| | 2e-101 | unnamed protein product [Coffea canephora] | |||||
| JMFN029B07 | Sequence | 587 | 010165 (12) | dbj|BAO49718.1| | 9e-132 | nuclear pore complex protein Sec13d [Nicotiana benthamiana] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig010165============================================1372 12 -------------------------------------------->JMFF008K23 <-------------------------------------------------------rJMFF008K23 29 ------------------------------------------->JMFF020I17 <-----------------------------------------------------rJMFF020I17 50 ----------------------------------------->JMFF019K20 <-----------------------------------------------------rJMFF019K20 58 ------------------------------------------>JMFF038C04 <------------------------------------------------rJMFF038C04
The following clones don't have the opposite end in this pair.
<------------------------------------------------------rJMFF008J16- ---------------------------------------------->JMFF043O20- ------------------------------------------>JMFN029B07- ---------------------------------------------->JMFN003D10-