List of clones in pair P014009.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I21Sequence541000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia597000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFF032K06Sequence463000303 (70)ref|XP_009776685.1|2e-65PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFF036I18Sequence626000303 (70)ref|XP_009776685.1|3e-82PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia608000303 (70)ref|XP_009776685.1|2e-82PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFF039L16Sequence608000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia539000303 (70)ref|XP_009776685.1|6e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFF040A22Sequence598000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia582000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFF048P16Sequence367000303 (70)ref|XP_009603986.1|1e-51PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia293000303 (70)ref|XP_009776685.1|9e-35PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN001B11Sequence526000303 (70)ref|XP_009627202.1|2e-79PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN001G03Sequence522000303 (70)ref|XP_009776685.1|3e-58PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN003D09Sequence575000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN004B05Sequence536000303 (70)ref|XP_009627202.1|2e-73PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN007D08Sequence574000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN007L18Sequence626000303 (70)ref|XP_009627202.1|8e-79PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN007P12Sequence581000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN008A18Sequence504000303 (70)ref|XP_009627202.1|4e-75PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN008E09Sequence563000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN008G22Sequence563000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN010F14Sequence551000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN010O07Sequence621000303 (70)ref|XP_009776685.1|4e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN011H07Sequence551000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN011M14Sequence554000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN012C19Sequence557000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN013F09Sequence537000303 (70)ref|XP_009776685.1|3e-81PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN013L09Sequence551000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN014D17Sequence560000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN015E09Sequence572000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN015O08Sequence559000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN019F05Sequence604000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN020G03Sequence533000303 (70)ref|XP_009776685.1|2e-81PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN025A10Sequence554000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN025F21Sequence479000303 (70)ref|XP_009776685.1|6e-39PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN025F23Sequence554000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN025H21Sequence546000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN025P05Sequence555000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN030I13Sequence513000303 (70)ref|XP_009627202.1|1e-77PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN030P01Sequence584000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN031B02Sequence628000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN031N24Sequence611000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN032N02Sequence550000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN032N13Sequence548000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN033K13Sequence616000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN034G24Sequence618000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN035N14Sequence565000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN036D22Sequence517000303 (70)ref|XP_009776685.1|4e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN040F01Sequence575000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN044A14Sequence577000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN044E18Sequence618000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMFN044E22Sequence554000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF002A05Sequence262000303 (70)ref|XP_006346076.1|1e-19PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Solanum570000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF010L10Sequence428000303 (70)ref|XP_009776685.1|4e-64PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF020D04Sequence612000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia553000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF022M19Sequence617000303 (70)ref|XP_009776685.1|4e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia572000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF030M16Sequence210000303 (70)ref|XP_009627202.1|2e-15PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF030N16Sequence632000303 (70)ref|XP_009776685.1|3e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia582000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF038H04Sequence632000303 (70)ref|XP_009776685.1|4e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia579000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF038J10Sequence618000303 (70)ref|XP_009776685.1|4e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia567000303 (70)ref|XP_009776685.1|2e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF043J18Sequence590000303 (70)ref|XP_009776685.1|1e-83PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia540000303 (70)ref|XP_009776685.1|8e-84PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia
JMSF045K04Sequence618000303 (70)ref|XP_009776685.1|2e-82PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia567000303 (70)ref|XP_009776685.1|1e-82PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Nicotia

Contig 303 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000303============================================ 782         
 173              ------------------------------------------------------------------------------->JMFF036I18          
                  <-----------------------------------------------------------------------------rJMFF036I18  
 190               -------------------------------------------------------------------->JMFF009I21                    
                   <---------------------------------------------------------------------------rJMFF009I21  
 200                    -------------------------------------------------------------------------------->JMSF030N16   
                        <-------------------------------------------------------------------------rJMSF030N16  
 200               ---------------------------------------------------------------------------->JMFF040A22            
                   <-------------------------------------------------------------------------rJMFF040A22  
 203               ------------------------------------------------------------------------------->JMSF038H04         
                   <-------------------------------------------------------------------------rJMSF038H04  
 205               ---------------------------------------------------------------------------->JMFF039L16            
                        <--------------------------------------------------------------------rJMFF039L16  
 210               ----------------------------------------------------------------------------->JMSF022M19           
                   <------------------------------------------------------------------------rJMSF022M19  
 211               --------------------------------->JMSF002A05                                                       
                   <------------------------------------------------------------------------rJMSF002A05  
 214               ----------------------------------------------------------------------------->JMSF038J10           
                   <------------------------------------------------------------------------rJMSF038J10  
 216               ----------------------------------------------------------------------------->JMSF045K04           
                   <-----------------------------------------------------------------------rJMSF045K04  
 228               ---------------------------------------------------------------------------->JMSF020D04            
                   <----------------------------------------------------------------------rJMSF020D04  
 242                    ------------------------------------------------------------------------->JMSF043J18          
                        <--------------------------------------------------------------------rJMSF043J18  
 429                                                --------------------------------------------->JMFF048P16          
                                                            <-------------------------------------rJMFF048P16

The following clones don't have the opposite end in this pair.

                                ---------------------------------------------------------------->JMFN008A18-          
                          --------------------------------------------------------------------->JMFN032N13-           
                       ----------------------------------------------------------------------->JMFN008E09-            
                         -------------------------------------------------------------------->JMFN025H21-             
                                --------------------------------------------------------------->JMFN004B05-           
                       ----------------------------------------------------------------------------->JMFN034G24-      
                         ----------------------------------------------------------------------->JMFN014D17-          
                         ---------------------------------------------------------------------->JMFN025P05-           
                       ------------------------------------------------------------------------>JMFN015E09-           
                      ------------------------------------------------------------------------->JMFN007P12-           
                          ---------------------------------------------------------------------->JMFN011H07-          
                     ----------------------------------------------------------------------------->JMFN031N24-        
                          ---------------------------------------------------------------------->JMFN025F23-          
                     ------------------------------------------------------------------------------>JMFN044E18-       
                  ------------------------------------------------------------------------------->JMFN010O07-         
                ---------------------------------------------------------->JMFF032K06-                                
                       ------------------------------------------------------------------------->JMFN044A14-          
                          ---------------------------------------------------------------------->JMFN013L09-          
                               ----------------------------------------------------------------->JMFN030I13-          
                       ---------------------------------------------------------------------------->JMFN019F05-       
                            ------------------------------------------------------------------->JMFN020G03-           
                          ---------------------------------------------------------------------->JMFN011M14-          
                         ---------------------------------------------------------------------->JMFN012C19-           
                       ------------------------------------------------------------------------->JMFN040F01-          
                      -------------------------------------------------------------------------->JMFN030P01-          
                            -------------------------------------------------------------------->JMFN013F09-          
                     ------------------------------------------------------------------------------->JMFN031B02-      
                          ---------------------------------------------------------------------->JMFN025A10-          
                      ------------------------------------------------------------------------------>JMFN007L18-      
                     ----------------------------------------------------------------->JMFN036D22-                    
                          ----------------------------------------------------------------------->JMFN015O08-         
                          ---------------------------------------------------------------------->JMFN044E22-          
                          -------------------------------------------->JMFN025F21-                                    
                        ---------------------------------------------------------------------------->JMFN033K13-      
                       ------------------------------------------------------------------------->JMFN007D08-          
                        ---------------------------------------------------------------------->JMFN010F14-            
                          --------------------------------------------------------------------->JMFN032N02-           
     ------------------------------------------------------------------>JMFN001G03-                                   
                       ----------------------------------------------------------------------->JMFN035N14-            
                    ------------------------------------------------------>JMSF010L10-                                
                              ------------------------------------------------------------------>JMFN001B11-          
                                        <--------------------------rJMSF030M16-                                       
                       ----------------------------------------------------------------------->JMFN008G22-            
                       ------------------------------------------------------------------------->JMFN003D09-