clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017M12 | Sequence | 604 | 005165 (18) | emb|CBI32689.3| | 8e-97 | unnamed protein product [Vitis vinifera] | 699 | 005165 (18) | emb|CBI32689.3| | 3e-96 | unnamed protein product [Vitis vinifera] |
JMFN007F05 | Sequence | 627 | 005165 (18) | emb|CBI32689.3| | 5e-98 | unnamed protein product [Vitis vinifera] | |||||
JMSF012B14 | Sequence | 452 | 005165 (18) | emb|CBI32689.3| | 1e-81 | unnamed protein product [Vitis vinifera] | 616 | 005165 (18) | emb|CBI32689.3| | 1e-96 | unnamed protein product [Vitis vinifera] |
JMSF013A13 | Sequence | 433 | 005165 (18) | ref|XP_004137806.1| | 9e-77 | PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus] ref|XP_004143809.1| | |||||
JMSF015N23 | Sequence | 231 | 005165 (18) | emb|CBI32689.3| | 1e-23 | unnamed protein product [Vitis vinifera] | 742 | 005165 (18) | emb|CBI32689.3| | 3e-97 | unnamed protein product [Vitis vinifera] |
JMSF020K13 | Sequence | 712 | 005165 (18) | emb|CBI32689.3| | 5e-98 | unnamed protein product [Vitis vinifera] | 668 | 005165 (18) | emb|CBI32689.3| | 3e-98 | unnamed protein product [Vitis vinifera] |
JMSF031K05 | Sequence | 640 | 005165 (18) | emb|CBI32689.3| | 7e-97 | unnamed protein product [Vitis vinifera] | 664 | 005165 (18) | emb|CBI32689.3| | 1e-96 | unnamed protein product [Vitis vinifera] |
JMSF035O24 | Sequence | 693 | 005165 (18) | emb|CBI32689.3| | 1e-97 | unnamed protein product [Vitis vinifera] | 618 | 005165 (18) | ref|XP_008795918.1| | 2e-82 | PREDICTED: 40S ribosomal protein S23-like [Phoenix dactylifera] |
JMSF047M21 | Sequence | 713 | 005165 (18) | emb|CBI32689.3| | 2e-97 | unnamed protein product [Vitis vinifera] | 731 | 005165 (18) | emb|CBI32689.3| | 1e-97 | unnamed protein product [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005165============================================ 769 25 ----------------------------------------------------------------------------------------->JMSF035O24 <-------------------------------------------------------------------------------rJMSF035O24 32 ----------------------------->JMSF015N23 <-----------------------------------------------------------------------------------------------rJMSF015N23 37 -------------------------------------------------------------------------------------------->JMSF047M21 <---------------------------------------------------------------------------------------------rJMSF047M21 72 ----------------------------------------------------------------------------->JMFF017M12 <------------------------------------------------------------------------------------------rJMFF017M12 99 -------------------------------------------------------------------------------------------->JMSF020K13 <--------------------------------------------------------------------------------------rJMSF020K13 106 ---------------------------------------------------------------------------------->JMSF031K05 <-------------------------------------------------------------------------------------rJMSF031K05 154 ---------------------------------------------------------->JMSF012B14 <-------------------------------------------------------------------------------rJMSF012B14
The following clones don't have the opposite end in this pair.
<-----------------------------------------------------rJMSF013A13- --------------------------------------------------------------------------------->JMFN007F05- <-------------------------------------------------------------------------------------rJMSF013P16* ------------------------------------------------------------------------------------------>JMSF047C05*