| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF002D19 | Sequence | 550 | 008633 (13) | ref|XP_009797939.1| | 1e-113 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana sylvestris] sp|Q9XG77.1|PS | 720 | 008633 (13) | ref|XP_011098408.1| | 6e-116 | PREDICTED: proteasome subunit alpha type-6 [Sesamum indicum] |
| JMFF013O07 | Sequence | 712 | 008633 (13) | ref|XP_011098408.1| | 5e-107 | PREDICTED: proteasome subunit alpha type-6 [Sesamum indicum] | |||||
| JMFF014C18 | Sequence | 536 | 008633 (13) | ref|XP_002271929.1| | 9e-98 | PREDICTED: proteasome subunit alpha type-6 [Vitis vinifera] emb|CAN73517.1| hypo | 777 | 008633 (13) | ref|XP_009380029.1| | 1e-139 | PREDICTED: proteasome subunit alpha type-6 [Musa acuminata subsp. malaccensis] |
| JMFF037J22 | Sequence | 512 | 008633 (13) | ref|XP_002271929.1| | 3e-96 | PREDICTED: proteasome subunit alpha type-6 [Vitis vinifera] emb|CAN73517.1| hypo | 506 | 008633 (13) | ref|XP_009380029.1| | 1e-58 | PREDICTED: proteasome subunit alpha type-6 [Musa acuminata subsp. malaccensis] |
| JMSF014F08 | Sequence | 324 | 008633 (13) | ref|XP_007012616.1| | 5e-56 | 20S proteasome subunit PAA2 isoform 2 [Theobroma cacao] gb|EOY30235.1| 20S prote | 785 | 008633 (13) | ref|XP_009631638.1| | 3e-146 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] |
| JMSF044B10 | Sequence | 761 | 008633 (13) | ref|XP_009631638.1| | 2e-118 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] | 633 | 008633 (13) | ref|XP_011098408.1| | 3e-75 | PREDICTED: proteasome subunit alpha type-6 [Sesamum indicum] |
| JMSF047L17 | Sequence | 670 | 008633 (13) | ref|XP_009631638.1| | 6e-146 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] | 777 | 008633 (13) | ref|XP_011098408.1| | 4e-126 | PREDICTED: proteasome subunit alpha type-6 [Sesamum indicum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig008633============================================ 977 40 -------------------------------------------------------------------->JMSF047L17 <-------------------------------------------------------------------------------rJMSF047L17 41 -------------------------------->JMSF014F08 <--------------------------------------------------------------------------------rJMSF014F08 58 -------------------------------------------------------------------->JMSF044B10 <----------------------------------------------------------------rJMSF044B10 88 ------------------------------------------>JMFF014C18 <-------------------------------------------------------------------------------rJMFF014C18 172 ------------------------------------------------------->JMFF002D19 <-----------------------------------------------------rJMFF002D19 228 -------------------------------------------->JMFF037J22 <--------------------------------rJMFF037J22
The following clones don't have the opposite end in this pair.
<------------------------------------------------------rJMFF013O07-