List of clones in pair P013826.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011K20Sequence463000714 (77)ref|XP_011085268.1|9e-78PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi554000714 (77)gb|ADL57411.1|2e-101chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMFF012K16Sequence559000714 (77)ref|XP_011085268.1|4e-104PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi635000714 (77)ref|XP_011085268.1|1e-134PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFF015P16Sequence453000714 (77)ref|XP_011085268.1|2e-79PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi662000714 (77)dbj|BAA32346.1|3e-130light-harvesting chlorophyll a/b-binding protein of photosystem II [Cryptomeria
JMFF025C07Sequence464000714 (77)ref|XP_011085268.1|2e-79PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi643000714 (77)ref|XP_011085268.1|5e-132PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFF031H21Sequence411000714 (77)ref|XP_004234241.1|121PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum]658000714 (77)ref|XP_011085268.1|6e-127PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFF031H24Sequence546000714 (77)ref|XP_011085268.1|2e-74PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi706000714 (77)gb|ADL57411.1|1e-105chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMFF032K09Sequence540000714 (77)ref|XP_011085268.1|4e-73PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi717000714 (77)ref|XP_006467509.1|1e-155PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Citrus sinen
JMFN001F09Sequence506000714 (77)ref|XP_011085268.1|4e-106PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN003J01Sequence627000714 (77)ref|XP_011085268.1|3e-123PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN004I16Sequence202000714 (77)ref|WP_039311834.1|2e-14hypothetical protein, partial [Paenibacillus sp. IHB B 3415] gb|KHL91111.1| hypo
JMFN009K19Sequence627000714 (77)ref|XP_011085268.1|2e-147PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN010A01Sequence624000714 (77)ref|XP_011085268.1|1e-122PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN010A03Sequence622000714 (77)ref|XP_011085268.1|1e-122PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN010E23Sequence627000714 (77)ref|XP_011085268.1|2e-124PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN012M12Sequence626000714 (77)ref|XP_011085268.1|5e-145PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN014C01Sequence619000714 (77)ref|XP_011085268.1|2e-121PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN014F16Sequence667000714 (77)ref|XP_011085268.1|7e-142PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN016N15Sequence612000714 (77)ref|XP_011085268.1|2e-120PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN016O10Sequence624000714 (77)ref|XP_011085268.1|9e-126PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN019G06Sequence623000714 (77)ref|XP_011085268.1|9e-126PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN028N16Sequence613000714 (77)ref|XP_011085268.1|2e-124PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN029P22Sequence601000714 (77)ref|XP_011085268.1|8e-118PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN030A07Sequence590000714 (77)ref|XP_011085268.1|3e-123PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN030D03Sequence297000714 (77)ref|XP_004170963.1|4e-39PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like,
JMFN033L05Sequence633000714 (77)ref|XP_011085268.1|1e-145PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN034E21Sequence381000714 (77)ref|WP_039311891.1|5e-59hypothetical protein, partial [Paenibacillus sp. IHB B 3415] gb|KHL91104.1| hypo
JMFN034O13Sequence649000714 (77)ref|XP_006467509.1|3e-123PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Citrus sinen
JMFN036F09Sequence595000714 (77)ref|XP_006467509.1|4e-140PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Citrus sinen
JMFN038D13Sequence600000714 (77)ref|XP_011085268.1|7e-114PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN038D17Sequence537000714 (77)gb|ADL57411.1|1e-93chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMFN038K17Sequence618000714 (77)ref|XP_011085268.1|3e-128PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN038M11Sequence613000714 (77)ref|XP_011085268.1|8e-119PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN041O18Sequence637000714 (77)ref|XP_011085268.1|2e-126PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN044C19Sequence587000714 (77)ref|XP_011085268.1|4e-124PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFN046D15Sequence590000714 (77)ref|XP_011085268.1|3e-115PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFS041C07Sequence640000714 (77)ref|XP_011085268.1|2e-126PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMFS064E01Sequence503000714 (77)ref|XP_004155624.1|7e-87PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like
JMSF002N01Sequence391000714 (77)ref|XP_011085268.1|1e-60PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi763000714 (77)ref|XP_011085268.1|2e-163PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF006M14Sequence308000714 (77)ref|XP_004170963.1|2e-38PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like,
JMSF010H24Sequence265000714 (77)ref|XP_004170963.1|2e-26PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like,
JMSF012B09Sequence241000714 (77)ref|XP_011085268.1|2e-20PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi728000714 (77)ref|XP_011085268.1|8e-170PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF014K04Sequence539000714 (77)ref|XP_011085268.1|4e-99PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi786000714 (77)ref|XP_011085268.1|1e-160PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF015J20Sequence451000714 (77)ref|XP_011085268.1|2e-75PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi777000714 (77)ref|XP_011085268.1|3e-169PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF015J21Sequence508000714 (77)gb|ADL57411.1|3e-98chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMSF019A11Sequence270000714 (77)ref|XP_004170963.1|2e-27PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like, 536000714 (77)gb|ADL57411.1|3e-99chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMSF026N11Sequence629000714 (77)ref|XP_011085268.1|1e-92PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi705000714 (77)ref|XP_006449644.1|2e-109hypothetical protein CICLE_v10016074mg [Citrus clementina] gb|ESR62884.1| hypoth
JMSF030H02Sequence629000714 (77)ref|XP_011085268.1|2e-119PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF033L19Sequence650000714 (77)ref|XP_011085268.1|2e-126PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi722000714 (77)ref|XP_006467509.1|1e-157PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Citrus sinen
JMSF034H17Sequence627000714 (77)ref|XP_011085268.1|2e-120PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi369000714 (77)ref|XP_009609717.1|3e-40PREDICTED: chlorophyll a-b binding protein 1D, partial [Nicotiana tomentosiform
JMSF038K19Sequence630000714 (77)ref|XP_011085268.1|3e-121PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi820000714 (77)ref|XP_011085268.1|1e-177PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF044O10Sequence765000714 (77)ref|XP_011085268.1|2e-153PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi533000714 (77)gb|ADL57411.1|5e-102chloroplast LHCII type I chlorophyll a-b binding precursor protein [Ipomoea nil
JMSF045F17Sequence790000714 (77)ref|XP_011085268.1|6e-152PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi764000714 (77)ref|XP_011085268.1|9e-161PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF045L18Sequence753000714 (77)ref|XP_011085268.1|1e-152PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF049P24Sequence628000714 (77)ref|XP_011085268.1|2e-121PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi667000714 (77)ref|XP_011085268.1|2e-130PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi
JMSF052M22Sequence591000714 (77)ref|XP_011085268.1|2e-110PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi816000714 (77)ref|XP_011085268.1|2e-177PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi

Contig 714 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000714============================================ 961         
  20 ----------------------------------------------->JMFF011K20                                                       
                                             <---------------------------------------------------------rJMFF011K20  
  21 ----------------------------------------------------------------->JMSF026N11                                     
                             <-------------------------------------------------------------------------rJMSF026N11  
  22 ------------------------------------------------------->JMSF014K04                                               
                     <---------------------------------------------------------------------------------rJMSF014K04  
  27  ---------------------------------------------------------------->JMSF049P24                                     
                                  <-------------------------------------------------------------------rJMSF049P24  
  30 --------------------------------------------------------------------------------->JMSF045F17                     
                      <-------------------------------------------------------------------------------rJMSF045F17  
  38 --------------------------->JMSF019A11                                                                           
                                             <-------------------------------------------------------rJMSF019A11  
  47 ----------------------------------------------->JMFF025C07                                                       
                                  <-----------------------------------------------------------------rJMFF025C07  
  49 ------------------------------------------>JMFF031H21                                                            
                                <-------------------------------------------------------------------rJMFF031H21  
  52 ------------------------------------------------------->JMFF032K09                                               
                         <--------------------------------------------------------------------------rJMFF032K09  
  55   ---------------------------------------------------------------------------->JMSF044O10                        
                                             <-------------------------------------------------------rJMSF044O10  
  55 ----------------------------------------------------------------->JMSF038K19                                     
              <-------------------------------------------------------------------------------------rJMSF038K19  
  56 ------------------------------------------------------------>JMSF052M22                                          
              <------------------------------------------------------------------------------------rJMSF052M22  
  57  ---------------------------------------------->JMFF015P16                                                       
                                <-------------------------------------------------------------------rJMFF015P16  
  57 ---------------------------------------->JMSF002N01                                                              
                    <------------------------------------------------------------------------------rJMSF002N01  
  59 ---------------------------------------------->JMSF015J20                                                        
                  <--------------------------------------------------------------------------------rJMSF015J20  
  59 --------------------------------------------------------->JMFF012K16                                             
                                 <-----------------------------------------------------------------rJMFF012K16  
  59 ------------------------------------------------------------------->JMSF033L19                                   
                        <--------------------------------------------------------------------------rJMSF033L19  
  75  ---------------------------------------------------------------->JMSF034H17                                     
                                                            <-------------------------------------rJMSF034H17  
 116  -------------------------------------------------------->JMFF031H24                                             
                                <------------------------------------------------------------rJMFF031H24  
 152 ------------------------>JMSF012B09                                                                              
              <---------------------------------------------------------------------------rJMSF012B09

The following clones don't have the opposite end in this pair.

                                                                --------------------------------------->JMFN034E21-   
         ---------------------------------------------------------------->JMFN038K17-                                 
                          ------------------------------------------------------------->JMFN036F09-                   
                             ---------------------------------------------------------------->JMFN012M12-             
        ------------------------------------------------------------>JMFN044C19-                                      
     ----------------------------------------------------------------->JMSF030H02-                                    
                                         ------------------------------------------------------------->JMFN038D13-    
       --------------------------------------------------------------->JMFN016N15-                                    
                                                  ------------------------------------------->JMFN038D17-             
       -------------------------------------------------------------->JMFN029P22-                                     
      ---------------------------------------------------------------->JMFN014C01-                                    
       -------------------------------------------------------------->JMFN038M11-                                     
                                      ---------------------------------------------------------------->JMFN010A03-    
           -------------------------------------------------->JMFN001F09-                                             
       ---------------------------------------------------------------------------->JMSF045L18-                       
        ---------------------------------------------------------------->JMFN019G06-                                  
        --------------------------------------------------------------->JMFN028N16-                                   
                                                    --------------------------------------------------->JMFS064E01-   
                                                                                  -------------------->JMFN004I16-    
       ------------------------------>JMFN030D03-                                                                     
     ------------------------------->JMSF006M14-                                                                      
         ----------------------------------------------------------------->JMFN003J01-                                
                                      ---------------------------------------------------------------->JMFN010A01-    
                      <-----------------------------------------------------------------------------rJMSF002K12*      
     -------------------------->JMSF010H24-                                                                           
        ---------------------------------------------------------------->JMFN016O10-                                  
       ----------------------------------------------------------------->JMFN041O18-                                  
        ------------------------------------------------------------->JMFN030A07-                                     
       ----------------------------------------------------------------->JMSF045O10*                                  
       ---------------------------------------------------------------->JMFN010E23-                                   
         -------------------------------------------------------------------->JMFN014F16-                             
       ------------------------------------------------------------------>JMFS041C07-                                 
       ------------------------------------------------------------->JMFN046D15-                                      
                ----------------------------------------------------------------->JMFN033L05-                         
                     ----------------------------------------------------------------->JMFN009K19-                    
                                              <----------------------------------------------------rJMSF015J21-       
                                     ------------------------------------------------------------------->JMFN034O13-