clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF006D02 | Sequence | 552 | 006722 (6) | ref|XP_011101485.1| | 2e-63 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 717 | 006722 (6) | ref|XP_011101485.1| | 1e-103 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] |
JMSF036E08 | Sequence | 640 | 006722 (6) | ref|XP_011101485.1| | 6e-89 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 715 | 006722 (6) | gb|KCW89258.1| | 8e-73 | hypothetical protein EUGRSUZ_A01555, partial [Eucalyptus grandis] |
JMSF048E17 | Sequence | 672 | 006722 (6) | ref|XP_011101485.1| | 5e-96 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 676 | 006722 (6) | ref|XP_011101485.1| | 2e-105 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006722============================================1067 6 ----------------------------------------------------------->JMSF036E08 <------------------------------------------------------------------rJMSF036E08 197 ------------------------------------------------->JMFF006D02 <-----------------------------------------------------------------rJMFF006D02 277 -------------------------------------------------------------->JMSF048E17 <--------------------------------------------------------------rJMSF048E17
The following clones don't have the opposite end in this pair.