clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001G06 | Sequence | 577 | 006015 (21) | emb|CDO97380.1| | 5e-38 | unnamed protein product [Coffea canephora] | 554 | 006015 (21) | emb|CDO97380.1| | 3e-38 | unnamed protein product [Coffea canephora] |
JMFF008G02 | Sequence | 492 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] | 455 | 006015 (21) | emb|CDO97380.1| | 1e-38 | unnamed protein product [Coffea canephora] |
JMFF019I01 | Sequence | 492 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] | 454 | 006015 (21) | emb|CDO97380.1| | 1e-38 | unnamed protein product [Coffea canephora] |
JMFF029G01 | Sequence | 476 | 006015 (21) | gb|ABD28547.2| | 1e-44 | Protein C6orf115, putative [Medicago truncatula] | 467 | 006015 (21) | gb|ABD28547.2| | 1e-44 | Protein C6orf115, putative [Medicago truncatula] |
JMFF032M22 | Sequence | 512 | 006015 (21) | emb|CDO97380.1| | 3e-38 | unnamed protein product [Coffea canephora] | 458 | 006015 (21) | emb|CDO97380.1| | 1e-38 | unnamed protein product [Coffea canephora] |
JMFF037J10 | Sequence | 510 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] | 471 | 006015 (21) | emb|CDO97380.1| | 1e-38 | unnamed protein product [Coffea canephora] |
JMFN001F05 | Sequence | 440 | 006015 (21) | emb|CDO97380.1| | 9e-39 | unnamed protein product [Coffea canephora] | |||||
JMFN030G09 | Sequence | 377 | 006015 (21) | emb|CDO97380.1| | 4e-39 | unnamed protein product [Coffea canephora] | |||||
JMFN037N07 | Sequence | 497 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] | |||||
JMFN042G02 | Sequence | 561 | 006015 (21) | emb|CDO97380.1| | 3e-37 | unnamed protein product [Coffea canephora] | |||||
JMFS026E12 | Sequence | 552 | 006015 (21) | emb|CDO97380.1| | 3e-38 | unnamed protein product [Coffea canephora] | |||||
JMSF012E04 | Sequence | 262 | 006015 (21) | emb|CDO97380.1| | 5e-27 | unnamed protein product [Coffea canephora] | 507 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] |
JMSF046K14 | Sequence | 511 | 006015 (21) | emb|CDO97380.1| | 3e-38 | unnamed protein product [Coffea canephora] | 457 | 006015 (21) | emb|CDO97380.1| | 2e-38 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006015============================================ 593 61 ------------------------------------------------------------------------------------------->JMFF001G06 <-----------------------------------------------------------------------------------------rJMFF001G06 86 ------------------------------------------->JMSF012E04 <------------------------------------------------------------------------------------rJMSF012E04 122 ----------------------------------------------------------------------------------->JMFF037J10 <------------------------------------------------------------------------------rJMFF037J10 126 ------------------------------------------------------------------------------->JMFF029G01 <------------------------------------------------------------------------------rJMFF029G01 135 ------------------------------------------------------------------------------------>JMFF032M22 <----------------------------------------------------------------------------rJMFF032M22 138 --------------------------------------------------------------------------------->JMFF008G02 <----------------------------------------------------------------------------rJMFF008G02 138 ----------------------------------------------------------------------------------->JMSF046K14 <----------------------------------------------------------------------------rJMSF046K14 139 --------------------------------------------------------------------------------->JMFF019I01 <----------------------------------------------------------------------------rJMFF019I01
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------->JMFN001F05- <----------------------------------------------------------------------------------------------JMFN042G02- ---------------------------------------------------------------------------------->JMFN037N07- ---------------------------------------------------------------------------------------->JMFS026E12- --------------------------------------------------------------->JMFN030G09-