| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF021I03 | Sequence | 549 | 001261 (9) | ref|XP_009801737.1| | 1e-37 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris] | 718 | 001261 (9) | ref|XP_009801737.1| | 6e-38 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris] |
| JMFN041K14 | Sequence | 623 | 001261 (9) | ref|XP_009801737.1| | 3e-38 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris] | |||||
| JMFN042G09 | Sequence | 588 | 001261 (9) | emb|CDP07388.1| | 1e-33 | unnamed protein product [Coffea canephora] | |||||
| JMSF001I08 | Sequence | 691 | 001261 (9) | emb|CDP07388.1| | 2e-29 | unnamed protein product [Coffea canephora] | |||||
| JMSF001J08 | Sequence | 261 | 001261 (9) | ref|XP_009801737.1| | 7e-07 | PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris] | 796 | 001261 (9) | emb|CDP07388.1| | 3e-34 | unnamed protein product [Coffea canephora] |
| JMSF002J08 | Sequence | 673 | 001261 (9) | ref|NP_001241283.1| | 8e-26 | uncharacterized protein LOC100800959 [Glycine max] gb|ACU17287.1| unknown [Glyci | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001261============================================ 892 17 --------------------------->JMSF001J08 <--------------------------------------------------------------------------------------rJMSF001J08 192 ----------------------------------------------------------->JMFF021I03 <-------------------------------------------------------------------------------rJMFF021I03
The following clones don't have the opposite end in this pair.
<-----------------------------------------------------------------------rJMSF002J08- ----------------------------------------------------------------->JMFN042G09- <---------------------------------------------------------------------------rJMSF047C01* <-----------------------------------------------------------------------rJMSF001I08- --------------------------------------------------------------------->JMFN041K14-