clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001G14 | Sequence | 631 | 010134 (24) | emb|CDP03502.1| | 1e-44 | unnamed protein product [Coffea canephora] | 737 | 010134 (24) | ref|NP_001241395.1| | 1e-12 | uncharacterized protein LOC100796372 [Glycine max] gb|ACU22871.1| unknown [Glyci |
JMFF002K20 | Sequence | 481 | 010134 (24) | gb|KDP28144.1| | 2e-40 | hypothetical protein JCGZ_13915 [Jatropha curcas] | 738 | 010134 (24) | ref|NP_001241395.1| | 1e-11 | uncharacterized protein LOC100796372 [Glycine max] gb|ACU22871.1| unknown [Glyci |
JMFF004M02 | Sequence | 476 | 010134 (24) | emb|CDP03502.1| | 3e-46 | unnamed protein product [Coffea canephora] | 760 | 010134 (24) | ref|XP_010269540.1| | 4e-17 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] |
JMFF013A24 | Sequence | 507 | 010134 (24) | gb|KDP28144.1| | 2e-40 | hypothetical protein JCGZ_13915 [Jatropha curcas] | 762 | 010134 (24) | ref|XP_010269540.1| | 4e-17 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] |
JMFF013H09 | Sequence | 603 | 010134 (24) | emb|CDP03502.1| | 2e-45 | unnamed protein product [Coffea canephora] | 545 | 010134 (24) | |||
JMFF013I20 | Sequence | 721 | 010134 (24) | ref|XP_007201343.1| | 1e-14 | hypothetical protein PRUPE_ppa011992mg [Prunus persica] gb|EMJ02542.1| hypotheti | |||||
JMFF035N10 | Sequence | 608 | 010134 (24) | emb|CDP03502.1| | 3e-45 | unnamed protein product [Coffea canephora] | 722 | 010134 (24) | ref|XP_007201343.1| | 5e-10 | hypothetical protein PRUPE_ppa011992mg [Prunus persica] gb|EMJ02542.1| hypotheti |
JMFF039K11 | Sequence | 641 | 010134 (24) | emb|CDP03502.1| | 4e-44 | unnamed protein product [Coffea canephora] | 714 | 010134 (24) | ref|XP_010556742.1| | 7e-07 | PREDICTED: uncharacterized protein OsI_027940-like isoform X1 [Tarenaya hassler |
JMFF040B04 | Sequence | 624 | 010134 (24) | emb|CDP03502.1| | 2e-39 | unnamed protein product [Coffea canephora] | 697 | 010134 (24) | ref|NP_001241395.1| | 4e-11 | uncharacterized protein LOC100796372 [Glycine max] gb|ACU22871.1| unknown [Glyci |
JMFF043E17 | Sequence | 633 | 010134 (24) | ref|XP_010269540.1| | 4e-45 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] | 576 | 010134 (24) | |||
JMFN035B04 | Sequence | 610 | 010134 (24) | ref|XP_010684508.1| | 2e-67 | PREDICTED: uncharacterized protein OsI_027940 [Beta vulgaris subsp. vulgaris] | |||||
JMFS056F08 | Sequence | 627 | 010134 (24) | ref|XP_010269540.1| | 3e-45 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] | |||||
JMFS059D02 | Sequence | 627 | 010134 (24) | ref|XP_010269540.1| | 3e-45 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] | |||||
JMSF046K11 | Sequence | 725 | 010134 (24) | ref|XP_010269540.1| | 5e-45 | PREDICTED: uncharacterized protein OsI_027940 [Nelumbo nucifera] | 816 | 010134 (24) | ref|XP_006444305.1| | 9e-17 | hypothetical protein CICLE_v10022431mg [Citrus clementina] ref|XP_006479938.1| P |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010134============================================1064 18 --------------------------------------------->JMFF002K20 <---------------------------------------------------------------------rJMFF002K20 84 --------------------------------------------------------->JMFF035N10 <-------------------------------------------------------------------rJMFF035N10 84 --------------------------------------------------------->JMFF039K11 <-------------------------------------------------------------------rJMFF039K11 85 -------------------------------------------->JMFF004M02 <-----------------------------------------------------------------------rJMFF004M02 90 ----------------------------------------------------------->JMFF043E17 <-----------------------------------------------------rJMFF043E17 100 --------------------------------------------------------->JMFF001G14 <--------------------------------------------------------------------rJMFF001G14 117 ---------------------------------------------------------->JMFF040B04 <-----------------------------------------------------------------rJMFF040B04 119 -------------------------------------------------------------------->JMSF046K11 <----------------------------------------------------------------------------rJMSF046K11 123 ----------------------------------------------->JMFF013A24 <----------------------------------------------------------------------rJMFF013A24 141 -------------------------------------------------------->JMFF013H09 <--------------------------------------------------rJMFF013H09
The following clones don't have the opposite end in this pair.
----------------------------------------------------------->JMFS059D02- ----------------------------------------------------------->JMFS056F08- -------------------------------->JMFN035B04- <--------------------------------------------------------------------rJMFF013I20-