List of clones in pair P013506.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J16Sequence580011188 (22)ref|XP_009803358.1|1e-81PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris]740011188 (22)gb|KJB28781.1|2e-124hypothetical protein B456_005G069200 [Gossypium raimondii]
JMFF035O10Sequence572011188 (22)ref|XP_009803358.1|3e-89PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris]696011188 (22)gb|KHG12802.1|5e-1154-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum]
JMFF046K06Sequence591011188 (22)ref|XP_009803358.1|3e-95PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris]520011188 (22)gb|KHG12802.1|3e-564-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum]
JMSF016F20Sequence242011188 (22)ref|XP_009803358.1|1e-10PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris]740011188 (22)gb|KJB28781.1|6e-136hypothetical protein B456_005G069200 [Gossypium raimondii]
JMSF019O13Sequence504011188 (22)ref|XP_009803358.1|1e-63PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris]745011188 (22)gb|KJB28782.1|6e-129hypothetical protein B456_005G069200 [Gossypium raimondii]
JMSF024G07Sequence668011188 (22)ref|XP_004229034.1|1e-101PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum]733011188 (22)gb|KJB28782.1|8e-128hypothetical protein B456_005G069200 [Gossypium raimondii]
JMSF025L10Sequence691011188 (22)ref|XP_004229034.1|3e-106PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum]712011188 (22)gb|KHG12802.1|1e-1244-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum]
JMSF044C08Sequence767011188 (22)ref|XP_010270863.1|3e-121PREDICTED: 30S ribosomal protein S1, chloroplastic [Nelumbo nucifera]735011188 (22)gb|KHG12802.1|2e-1244-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum]
JMSF047F10Sequence708011188 (22)ref|XP_004229034.1|3e-108PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum]745011188 (22)gb|KJB28782.1|6e-129hypothetical protein B456_005G069200 [Gossypium raimondii]
JMSF048K13Sequence695011188 (22)ref|XP_004229034.1|5e-107PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum]738011188 (22)gb|KJB28782.1|6e-127hypothetical protein B456_005G069200 [Gossypium raimondii]
JMSF051A05Sequence666011188 (22)ref|XP_004229034.1|9e-100PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum]746011188 (22)gb|KJB28782.1|6e-129hypothetical protein B456_005G069200 [Gossypium raimondii]

Contig 11188 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011188============================================1533         
  37   -------------------------------------->JMFF046K06                                                              
                                                                       <---------------------------------rJMFF046K06  
  64 ------------------------------------->JMFF004J16                                                                 
                                                     <-----------------------------------------------rJMFF004J16  
  70 ------------------------------------------>JMSF051A05                                                            
                                                   <------------------------------------------------rJMSF051A05  
  72 -------------------------------->JMSF019O13                                                                      
                                                   <------------------------------------------------rJMSF019O13  
  73 -------------------------------------------->JMSF048K13                                                          
                                                    <-----------------------------------------------rJMSF048K13  
  82 --------------------------------------------->JMSF047F10                                                         
                                                    <-----------------------------------------------rJMSF047F10  
  83  ------------------------------------------>JMSF024G07                                                           
                                                    <-----------------------------------------------rJMSF024G07  
  84 -------------------------------------------->JMSF025L10                                                          
                                                      <---------------------------------------------rJMSF025L10  
  87   ------------------------------------------------->JMSF044C08                                                   
                                                     <-----------------------------------------------rJMSF044C08  
  98    ------------------------------------>JMFF035O10                                                               
                                                        <--------------------------------------------rJMFF035O10  
 136  --------------->JMSF016F20                                                                                      
                                                  <-----------------------------------------------rJMSF016F20

The following clones don't have the opposite end in this pair.