clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012N05 | Sequence | 569 | 004543 (14) | ref|XP_009786123.1| | 194 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | 797 | 004543 (14) | ref|XP_006346625.1| | 195 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
JMFF021K13 | Sequence | 428 | 004543 (14) | ref|XP_011073282.1| | 129 | PREDICTED: uncharacterized protein LOC105158282 [Sesamum indicum] | 650 | 004543 (14) | ref|XP_006346625.1| | 147 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
JMFF026D05 | Sequence | 569 | 004543 (14) | ref|XP_011073282.1| | 171 | PREDICTED: uncharacterized protein LOC105158282 [Sesamum indicum] | 740 | 004543 (14) | ref|XP_006346625.1| | 174 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
JMFF048A03 | Sequence | 592 | 004543 (14) | ref|XP_011073282.1| | 170 | PREDICTED: uncharacterized protein LOC105158282 [Sesamum indicum] | 596 | 004543 (14) | ref|XP_006346625.1| | 72.8 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
JMFN010A22 | Sequence | 624 | 004543 (14) | ref|XP_009786123.1| | 248 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | |||||
JMFN029J13 | Sequence | 485 | 004543 (14) | ref|XP_011073282.1| | 164 | PREDICTED: uncharacterized protein LOC105158282 [Sesamum indicum] | |||||
JMFN038K14 | Sequence | 595 | 004543 (14) | ref|XP_009786123.1| | 269 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | |||||
JMFS154F10 | Sequence | 621 | 004543 (14) | ref|XP_009786123.1| | 249 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | |||||
JMSF017P18 | Sequence | 260 | 004543 (14) | ref|XP_006346659.1| | 113 | PREDICTED: uncharacterized protein LOC102603832 [Solanum tuberosum] | 800 | 004543 (14) | ref|XP_006346625.1| | 257 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004543============================================1702 5 ---------------------------------->JMFF048A03 <---------------------------------rJMFF048A03 68 ------------------------>JMFF021K13 <-------------------------------------rJMFF021K13 93 -------------------------------->JMFF012N05 <----------------------------------------------rJMFF012N05 93 -------------------------------->JMFF026D05 <------------------------------------------rJMFF026D05 368 -------------->JMSF017P18 <----------------------------------------------rJMSF017P18
The following clones don't have the opposite end in this pair.
---------------------------------->JMFN038K14- ------------------------------------>JMFS154F10- ----------------------------------->JMFN010A22- --------------------------->JMFN029J13-