clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP004C12 | Sequence | 619 | 011457 (50) | gb|AHX74092.1| | 8e-127 | chitodextrinase [Eucommia ulmoides] | |||||
JMFF001G05 | Sequence | 528 | 011457 (50) | ref|XP_009768837.1| | 2e-53 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | 731 | 011457 (50) | gb|AHX74092.1| | 5e-77 | chitodextrinase [Eucommia ulmoides] |
JMFF009I22 | Sequence | 618 | 011457 (50) | ref|XP_006349881.1| | 1e-83 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 669 | 011457 (50) | gb|AHX74092.1| | 4e-67 | chitodextrinase [Eucommia ulmoides] |
JMFF011O19 | Sequence | 563 | 011457 (50) | ref|XP_006349881.1| | 3e-76 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 689 | 011457 (50) | gb|AHX74092.1| | 8e-50 | chitodextrinase [Eucommia ulmoides] |
JMFF012G20 | Sequence | 297 | 011457 (50) | ref|XP_009768837.1| | 2e-52 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | |||||
JMFF013J03 | Sequence | 594 | 011457 (50) | ref|XP_006349881.1| | 8e-77 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 677 | 011457 (50) | gb|AHX74092.1| | 2e-65 | chitodextrinase [Eucommia ulmoides] |
JMFF013O08 | Sequence | 575 | 011457 (50) | ref|XP_006349881.1| | 8e-67 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 684 | 011457 (50) | gb|AHX74092.1| | 5e-67 | chitodextrinase [Eucommia ulmoides] |
JMFF017D20 | Sequence | 577 | 011457 (50) | ref|XP_006349881.1| | 1e-76 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 805 | 011457 (50) | gb|AHX74092.1| | 6e-94 | chitodextrinase [Eucommia ulmoides] |
JMFF022E17 | Sequence | 516 | 011457 (50) | ref|XP_009768837.1| | 2e-54 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | 662 | 011457 (50) | gb|AHX74092.1| | 2e-58 | chitodextrinase [Eucommia ulmoides] |
JMFF023L04 | Sequence | 473 | 011457 (50) | ref|XP_009768837.1| | 3e-53 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | 701 | 011457 (50) | gb|AHX74092.1| | 7e-68 | chitodextrinase [Eucommia ulmoides] |
JMFF023P21 | Sequence | 725 | 011457 (50) | gb|AHX74092.1| | 3e-74 | chitodextrinase [Eucommia ulmoides] | |||||
JMFF029B05 | Sequence | 582 | 011457 (50) | ref|XP_006349881.1| | 9e-78 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 640 | 011457 (50) | gb|AHX74092.1| | 2e-53 | chitodextrinase [Eucommia ulmoides] |
JMFF031M07 | Sequence | 505 | 011457 (50) | ref|XP_009768837.1| | 1e-54 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | 673 | 011457 (50) | gb|AHX74092.1| | 5e-68 | chitodextrinase [Eucommia ulmoides] |
JMFF032N20 | Sequence | 328 | 011457 (50) | ref|XP_010094321.1| | 6e-09 | Chitinase-like protein 2 [Morus notabilis] gb|EXB55741.1| Chitinase-like protein | |||||
JMFF035M09 | Sequence | 625 | 011457 (50) | ref|XP_006349881.1| | 2e-77 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 669 | 011457 (50) | gb|AHX74092.1| | 2e-58 | chitodextrinase [Eucommia ulmoides] |
JMFF037E21 | Sequence | 528 | 011457 (50) | ref|XP_006349881.1| | 9e-61 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 734 | 011457 (50) | gb|AHX74092.1| | 5e-82 | chitodextrinase [Eucommia ulmoides] |
JMFF038G07 | Sequence | 679 | 011457 (50) | gb|AHX74092.1| | 7e-66 | chitodextrinase [Eucommia ulmoides] | |||||
JMFF046K04 | Sequence | 578 | 011457 (50) | ref|XP_006349881.1| | 3e-61 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 542 | 011457 (50) | ref|XP_006364661.1| | 7e-21 | PREDICTED: chitinase-like protein 1-like [Solanum tuberosum] |
JMFF051J03 | Sequence | 616 | 011457 (50) | ref|XP_006349881.1| | 4e-84 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 328 | 011457 (50) | |||
JMFN010M10 | Sequence | 624 | 011457 (50) | ref|XP_006349881.1| | 5e-135 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | |||||
JMFN042J06 | Sequence | 441 | 011457 (50) | ref|XP_006364661.1| | 9e-35 | PREDICTED: chitinase-like protein 1-like [Solanum tuberosum] | |||||
JMFS038D05 | Sequence | 612 | 011457 (50) | ref|XP_006349881.1| | 3e-91 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | |||||
JMFS112C04 | Sequence | 536 | 011457 (50) | ref|XP_009768837.1| | 1e-19 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | |||||
JMFS166C07 | Sequence | 631 | 011457 (50) | ref|XP_006349881.1| | 3e-76 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | |||||
JMSF019B09 | Sequence | 227 | 011457 (50) | 772 | 011457 (50) | gb|AHX74092.1| | 4e-97 | chitodextrinase [Eucommia ulmoides] | |||
JMSF027A19 | Sequence | 403 | 011457 (50) | ref|XP_009768837.1| | 3e-23 | PREDICTED: chitinase-like protein 2 [Nicotiana sylvestris] | 222 | 011457 (50) | ref|XP_010094321.1| | 1e-06 | Chitinase-like protein 2 [Morus notabilis] gb|EXB55741.1| Chitinase-like protein |
JMSF029H07 | Sequence | 622 | 011457 (50) | ref|XP_006349881.1| | 7e-93 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 732 | 011457 (50) | gb|AHX74092.1| | 5e-61 | chitodextrinase [Eucommia ulmoides] |
JMSF029I11 | Sequence | 626 | 011457 (50) | ref|XP_006349881.1| | 5e-76 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 747 | 011457 (50) | gb|AHX74092.1| | 9e-90 | chitodextrinase [Eucommia ulmoides] |
JMSF032C03 | Sequence | 691 | 011457 (50) | ref|XP_006349881.1| | 5e-110 | PREDICTED: chitinase-like protein 2-like [Solanum tuberosum] | 743 | 011457 (50) | gb|AHX74092.1| | 2e-89 | chitodextrinase [Eucommia ulmoides] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011457============================================1422 18 ------------------------------------>JMFF001G05 <--------------------------------------------------rJMFF001G05 46 ----------------------------------------->JMFF013J03 <-----------------------------------------------rJMFF013J03 55 -------------------------------->JMFF023L04 <------------------------------------------------rJMFF023L04 55 ----------------------------------->JMFF031M07 <----------------------------------------------rJMFF031M07 55 ------------------------------------------>JMFF009I22 <----------------------------------------------rJMFF009I22 57 -------------------------------------->JMFF013O08 <-----------------------------------------------rJMFF013O08 57 ------------------------------------>JMFF037E21 <---------------------------------------------------rJMFF037E21 58 ------------------------------------------>JMFF051J03 <-------------------rJMFF051J03 59 --------------------------------------->JMFF017D20 <-------------------------------------------------------rJMFF017D20 69 -------------------------------------->JMFF035M09 <----------------------------------------------rJMFF035M09 72 ---------------------------------------->JMFF029B05 <-------------------------------------------rJMFF029B05 74 --------------------------------->JMFF046K04 <----------------------------------rJMFF046K04 80 --------------------------------------->JMFF011O19 <------------------------------------------------rJMFF011O19 83 -------------------------------->JMFF022E17 <---------------------------------------------rJMFF022E17 100 ------------------------------------------->JMSF029H07 <--------------------------------------------------rJMSF029H07 114 ------------------------------------------------>JMSF032C03 <---------------------------------------------------rJMSF032C03 117 -------------------------------------->JMSF029I11 <----------------------------------------------------rJMSF029I11 118 --------->JMSF019B09 <------------------------------------------------------rJMSF019B09 305 ------------------------>JMSF027A19 <--------------rJMSF027A19
The following clones don't have the opposite end in this pair.
<----------------------rJMFF032N20- ------------------------------------------->JMFN010M10- <----------------------------------------------rJMFF038G07- -------------------->JMFF012G20- ------------------------------------------>JMFS038D05- ------------------------------------------->rJMCP004C12- -------------------------------------->JMFS166C07- ---------------------------------->JMFS112C04- -------------------------------------->JMSF020O01# <-------------------------------------------------------rJMSF011N15* <-------------------------------------------------rJMFF023P21- ----------------------------->JMFN042J06-