List of clones in pair P013416.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP002D12Sequence194000677 (67)ref|XP_010938173.1|5e-13PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Elaeis guineensis]
JMFF006D21Sequence610000677 (67)ref|XP_011003162.1|3e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]610000677 (67)ref|XP_011003162.1|3e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFF006P10Sequence606000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]602000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFF008O17Sequence618000677 (67)ref|XP_011003162.1|4e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]628000677 (67)ref|XP_011003162.1|4e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFF019M01Sequence575000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]610000677 (67)ref|XP_011003162.1|7e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFF042O20Sequence620000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]419000677 (67)ref|XP_001774978.1|3e-31predicted protein [Physcomitrella patens] gb|EDQ60244.1| predicted protein [Phys
JMFF049D22Sequence617000677 (67)ref|XP_011003162.1|3e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN003L17Sequence601000677 (67)ref|XP_011003162.1|3e-77PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN004I01Sequence551000677 (67)gb|AAZ83341.1|1e-73ubiquitin extension protein [Gossypium hirsutum] gb|KJB41754.1| hypothetical pro
JMFN004N20Sequence640000677 (67)ref|XP_011003162.1|6e-87PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN005M11Sequence530000677 (67)ref|XP_011003162.1|3e-68PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN005O23Sequence578000677 (67)ref|XP_011003162.1|1e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN007J19Sequence500000677 (67)ref|XP_011003162.1|1e-87PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN009B08Sequence585000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN009I08Sequence581000677 (67)ref|XP_011003162.1|7e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN009K03Sequence604000677 (67)ref|XP_011003162.1|1e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN011A01Sequence609000677 (67)ref|XP_011003162.1|3e-87PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN011J05Sequence584000677 (67)ref|XP_011003162.1|8e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN011J14Sequence586000677 (67)ref|XP_011003162.1|1e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN012D05Sequence606000677 (67)ref|XP_011003162.1|1e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN012J21Sequence593000677 (67)ref|XP_011003162.1|2e-82PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN013B11Sequence594000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN014I05Sequence628000677 (67)ref|XP_011003162.1|3e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN014J19Sequence598000677 (67)ref|XP_011003162.1|6e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN015N04Sequence613000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN016J10Sequence612000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN017O16Sequence548000677 (67)ref|XP_011003162.1|6e-73PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN018G15Sequence590000677 (67)ref|XP_011003162.1|4e-83PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN018M09Sequence585000677 (67)ref|XP_011003162.1|1e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN019A14Sequence565000677 (67)ref|XP_011003162.1|1e-77PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN020C24Sequence562000677 (67)ref|XP_011003162.1|1e-76PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN020I23Sequence483000677 (67)ref|XP_011003162.1|2e-47PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN028L13Sequence581000677 (67)ref|XP_011003162.1|1e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN031N15Sequence585000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN032A04Sequence592000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN032B05Sequence610000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN033D14Sequence593000677 (67)ref|XP_011003162.1|3e-83PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN033G01Sequence215000677 (67)gb|KCW58176.1|7e-43hypothetical protein EUGRSUZ_H00892 [Eucalyptus grandis]
JMFN033P21Sequence592000677 (67)ref|XP_011003162.1|4e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN033P23Sequence598000677 (67)ref|XP_011003162.1|2e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN034M12Sequence600000677 (67)ref|XP_011003162.1|1e-62PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN035B13Sequence582000677 (67)ref|XP_011003162.1|7e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN035D06Sequence585000677 (67)ref|XP_011003162.1|1e-81PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN035J01Sequence586000677 (67)gb|AAZ83341.1|2e-80ubiquitin extension protein [Gossypium hirsutum] gb|KJB41754.1| hypothetical pro
JMFN035K02Sequence596000677 (67)ref|XP_011003162.1|9e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN036O17Sequence613000677 (67)ref|XP_011003162.1|5e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN038E22Sequence612000677 (67)ref|XP_011003162.1|2e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN038N02Sequence597000677 (67)ref|XP_011003162.1|9e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN038N19Sequence634000677 (67)ref|XP_011003162.1|7e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN041I08Sequence614000677 (67)ref|XP_011003162.1|5e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN042G13Sequence597000677 (67)ref|XP_011003162.1|9e-85PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN043I22Sequence534000677 (67)ref|XP_011003162.1|3e-60PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN045P07Sequence623000677 (67)ref|XP_011003162.1|2e-86PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN046E08Sequence597000677 (67)ref|XP_011003162.1|3e-87PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMFN046O02Sequence615000677 (67)ref|XP_011003162.1|5e-84PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMSF014P02Sequence368000677 (67)ref|XP_003629895.1|6e-55Ubiquitin [Medicago truncatula]618000677 (67)ref|XP_011003162.1|3e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMSF022D23Sequence585000677 (67)ref|XP_011003162.1|2e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]527000677 (67)ref|XP_011003162.1|1e-88PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]
JMSF029P24Sequence571000677 (67)ref|XP_011003162.1|4e-55PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]527000677 (67)ref|XP_011003162.1|3e-55PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica]

Contig 677 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000677============================================ 651         
  20  ---------------------------------------------------------------------------------------------->JMFF008O17       
      <------------------------------------------------------------------------------------------------rJMFF008O17  
  31 -------------------------------------------------------->JMSF014P02                                              
     <----------------------------------------------------------------------------------------------rJMSF014P02  
  38   --------------------------------------------------------------------------------------------->JMFF006D21       
       <---------------------------------------------------------------------------------------------rJMFF006D21  
  38 ---------------------------------------------------------------------------------------->JMFF019M01              
     <---------------------------------------------------------------------------------------------rJMFF019M01  
  47   -------------------------------------------------------------------------------------------->JMFF006P10        
       <--------------------------------------------------------------------------------------------rJMFF006P10  
 124         --------------------------------------------------------------------------------------->JMSF029P24       
             <--------------------------------------------------------------------------------rJMSF029P24  
 124   ---------------------------------------------------------------------------------------->JMSF022D23            
       <--------------------------------------------------------------------------------rJMSF022D23  
 181  ---------------------------------------------------------------------------------------------->JMFF042O20       
                                             <--------------------------------rJMFF042O20

The following clones don't have the opposite end in this pair.

         ------------------------------------------------------------------------------------------->JMFN033P23-      
         --------------------------------------------------------------------------------------------->JMFN038E22-    
         ------------------------------------------------------------------------------------------->JMFN014I05-      
       ---------------------------------------------------------------------------------------------->JMFF049D22-     
            ----------------------------------------------------------------------------------------->JMFN011J05-     
           ----------------------------------------------------------------------------------------->JMFN018M09-      
       ------------------------------------------------------------------------------------------------->JMFN038N19-  
       --------------------------------------------------------------------------------------------->JMFN016J10-      
          ------------------------------------------------------------------------------------------>JMFN033P21-      
               -------------------------------------------------------------------------------------->JMFN020C24-     
           ----------------------------------------------------------------------------------------->JMFN035J01-      
           ----------------------------------------------------------------------------------------->JMFN011J14-      
          ---------------------------------------------------------------------------------------------->JMFN036O17-  
           ----------------------------------------------------------------------------------------->JMFN028L13-      
          ------------------------------------------------------------------------------------------->JMFN013B11-     
           ------------------------------------------------------------------------------------------->JMFN012J21-    
      <----------------------------------------------------------------------------------------rJMSF032H18*           
                                                                   ----------------------------->rJMCP002D12-         
         ------------------------------------------------------------------------------------------->JMFN038N02-      
         -------------------------------------------------------------------------------------------->JMFN009K03-     
          ----------------------------------------------------------------------------------------->JMFN031N15-       
           ------------------------------------------------------------------------------------------>JMFN018G15-     
                  ---------------------------------------------------------------------->JMFN015N04-                  
         ----------------------------------------------------------------------------------------------->JMFN045P07-  
         --------------------------------------------------------------------------------------------->JMFN012D05-    
           ----------------------------------------------------------------------------------------->JMFN035D06-      
        -------------------------------------------------------------------------------------------->JMFN034M12-      
        ------------------------------------------------------------------------------------------->JMFN004N20-       
          ---------------------------------------------------------------------------------------------->JMFN046O02-  
                                <-------------------------------------------------------------------JMFN020I23-       
         ------------------------------------------------------------------------------------------->JMFN014J19-      
              <-------------------------------------------------------------------------------------JMFN003L17-       
            ----------------------------------------------------------------------------------------->JMFN009I08-     
         ------------------------------------------------------------------------------------------->JMFN042G13-      
          ------------------------------------------------------------------------------------------->JMFN033D14-     
            ------------------------------------------------------------------------------------->JMFN019A14-         
                 ------------------------------------------------------------------------------------>JMFN017O16-     
        -------------------------------->JMFN033G01-                                                                  
          ----------------------------------------------------------------------------------------->JMFN009B08-       
        ---------------------------------------------------------------------------->JMFN007J19-                      
           ------------------------------------------------------------------------------------>JMFN004I01-           
         ----------------------------------------------------------------------------------------->JMFN035K02-        
                    --------------------------------------------------------------------------------->JMFN005M11-     
           ---------------------------------------------------------------------------------------->JMFN005O23-       
       --------------------------------------------------------------------------------------------->JMFN011A01-      
       ---------------------------------------------------------------------------------------------->JMFN041I08-     
       --------------------------------------------------------------------------------------------->JMFN032B05-      
          ------------------------------------------------------------------------------------------>JMFN032A04-      
                    <---------------------------------------------------------------------------------JMFN043I22-     
        ------------------------------------------------------------------------------------------->JMFN046E08-       
            ----------------------------------------------------------------------------------------->JMFN035B13-