clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016B19 | Sequence | 652 | 011513 (9) | ref|XP_011080147.1| | 4e-44 | PREDICTED: tetraspanin-18 [Sesamum indicum] | 673 | 011513 (9) | ref|XP_004247113.1| | 2e-52 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMFF045G09 | Sequence | 635 | 011513 (9) | ref|XP_011080147.1| | 2e-59 | PREDICTED: tetraspanin-18 [Sesamum indicum] | 651 | 011513 (9) | ref|XP_004247113.1| | 4e-19 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMSF004J18 | Sequence | 423 | 011513 (9) | ref|XP_008235542.1| | 4e-20 | PREDICTED: tetraspanin-18-like [Prunus mume] | |||||
JMSF047O19 | Sequence | 651 | 011513 (9) | ref|XP_011080147.1| | 2e-61 | PREDICTED: tetraspanin-18 [Sesamum indicum] | 731 | 011513 (9) | ref|XP_006350290.1| | 2e-69 | PREDICTED: tetraspanin-20-like isoform X1 [Solanum tuberosum] |
JMSF051C14 | Sequence | 687 | 011513 (9) | ref|XP_006350290.1| | 8e-80 | PREDICTED: tetraspanin-20-like isoform X1 [Solanum tuberosum] | 790 | 011513 (9) | ref|XP_004247113.1| | 2e-54 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011513============================================1346 77 ---------------------------------------------->JMFF045G09 <-----------------------------------------------rJMFF045G09 86 ----------------------------------------------->JMFF016B19 <-------------------------------------------------rJMFF016B19 178 ----------------------------------------------->JMSF047O19 <-----------------------------------------------------rJMSF047O19 242 -------------------------------------------------->JMSF051C14 <----------------------------------------------------------rJMSF051C14
The following clones don't have the opposite end in this pair.
------------------------------>JMSF004J18-