| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004H19 | Sequence | 496 | 007842 (13) | gb|KDP36873.1| | 5e-27 | hypothetical protein JCGZ_08164 [Jatropha curcas] | 800 | 007842 (13) | ref|XP_006435261.1| | 1e-126 | hypothetical protein CICLE_v10001692mg [Citrus clementina] ref|XP_006473721.1| P |
| JMFF007A08 | Sequence | 501 | 007842 (13) | ref|XP_002510599.1| | 5e-52 | conserved hypothetical protein [Ricinus communis] gb|EEF52786.1| conserved hypot | 698 | 007842 (13) | ref|XP_006435261.1| | 3e-127 | hypothetical protein CICLE_v10001692mg [Citrus clementina] ref|XP_006473721.1| P |
| JMFF017J23 | Sequence | 311 | 007842 (13) | ref|XP_011083421.1| | 5e-11 | PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Sesamum indicum] | 765 | 007842 (13) | ref|XP_007017913.1| | 9e-144 | Chloroplastic drought-induced stress protein of 32 kD [Theobroma cacao] gb|EOY1 |
| JMFF018I05 | Sequence | 510 | 007842 (13) | ref|XP_002510599.1| | 2e-54 | conserved hypothetical protein [Ricinus communis] gb|EEF52786.1| conserved hypot | 551 | 007842 (13) | ref|XP_002285902.1| | 9e-71 | PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Vitis vinifera] |
| JMFN029D16 | Sequence | 580 | 007842 (13) | gb|KDP36873.1| | 5e-59 | hypothetical protein JCGZ_08164 [Jatropha curcas] | |||||
| JMSF017M05 | Sequence | 492 | 007842 (13) | gb|KDP36873.1| | 8e-33 | hypothetical protein JCGZ_08164 [Jatropha curcas] | 742 | 007842 (13) | gb|KDP36873.1| | 7e-140 | hypothetical protein JCGZ_08164 [Jatropha curcas] |
| JMSF035L13 | Sequence | 661 | 007842 (13) | gb|KDP36873.1| | 2e-83 | hypothetical protein JCGZ_08164 [Jatropha curcas] | 679 | 007842 (13) | ref|XP_006435261.1| | 1e-127 | hypothetical protein CICLE_v10001692mg [Citrus clementina] ref|XP_006473721.1| P |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig007842============================================1088 5 --------------------------------------------->JMFF004H19 <-------------------------------------------------------------------------rJMFF004H19 46 -------------------------------------------->JMSF017M05 <-------------------------------------------------------------------rJMSF017M05 97 --------------------------------------------->JMFF007A08 <---------------------------------------------------------------rJMFF007A08 119 ---------------------------------------------->JMFF018I05 <-------------------------------------------------rJMFF018I05 123 ---------------------------->JMFF017J23 <---------------------------------------------------------------------rJMFF017J23 123 ------------------------------------------------------------>JMSF035L13 <-------------------------------------------------------------rJMSF035L13
The following clones don't have the opposite end in this pair.
---------------------------------------------------->JMFN029D16-