clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004J24 | Sequence | 629 | 011038 (13) | ref|XP_009619960.1| | 1e-108 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | 661 | 011038 (13) | ref|XP_009619960.1| | 2e-108 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo |
JMFF018F20 | Sequence | 557 | 011038 (13) | ref|XP_009619960.1| | 2e-105 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | 703 | 011038 (13) | ref|XP_009619960.1| | 2e-108 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo |
JMFF035D11 | Sequence | 662 | 011038 (13) | ref|XP_009619960.1| | 8e-108 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | 692 | 011038 (13) | ref|XP_009619960.1| | 1e-107 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo |
JMFF046D19 | Sequence | 504 | 011038 (13) | ref|XP_009619960.1| | 8e-97 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | 409 | 011038 (13) | gb|AAQ08194.1| | 1e-32 | eukaryotic translation initiation factor 5A isoform IV [Hevea brasiliensis] |
JMFN015I09 | Sequence | 613 | 011038 (13) | ref|XP_009619960.1| | 6e-109 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | |||||
JMFN016E05 | Sequence | 627 | 011038 (13) | ref|XP_009619960.1| | 6e-109 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | |||||
JMFN029M04 | Sequence | 643 | 011038 (13) | ref|XP_009619960.1| | 4e-109 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | |||||
JMFN030N17 | Sequence | 620 | 011038 (13) | ref|XP_009619960.1| | 7e-109 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo | |||||
JMFN036M13 | Sequence | 644 | 011038 (13) | ref|XP_009619960.1| | 1e-108 | PREDICTED: eukaryotic translation initiation factor 5A-2 [Nicotiana tomentosifo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011038============================================ 796 21 -------------------------------------------------------------->JMFF046D19 <--------------------------------------------------rJMFF046D19 93 --------------------------------------------------------------------->JMFF018F20 <---------------------------------------------------------------------------------------rJMFF018F20 104 ---------------------------------------------------------------------------------->JMFF035D11 <--------------------------------------------------------------------------------------rJMFF035D11 143 ------------------------------------------------------------------------------>JMFF004J24 <---------------------------------------------------------------------------------rJMFF004J24
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------>JMFN016E05- ----------------------------------------------------------------------------->JMFN030N17- -------------------------------------------------------------------------------->JMFN036M13- ---------------------------------------------------------------------------->JMFN015I09- -------------------------------------------------------------------------------->JMFN029M04-