clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016C06 | Sequence | 589 | 009350 (14) | ref|XP_009617730.1| | 3e-58 | PREDICTED: probable aquaporin SIP2-1 [Nicotiana tomentosiformis] | 657 | 009350 (14) | ref|XP_011040686.1| | 266 | PREDICTED: probable aquaporin SIP2-1 isoform X1 [Populus euphratica] |
JMFF022H07 | Sequence | 474 | 009350 (14) | ref|XP_009617730.1| | 4e-36 | PREDICTED: probable aquaporin SIP2-1 [Nicotiana tomentosiformis] | 615 | 009350 (14) | ref|XP_011040686.1| | 242 | PREDICTED: probable aquaporin SIP2-1 isoform X1 [Populus euphratica] |
JMFF026C07 | Sequence | 525 | 009350 (14) | ref|XP_009617730.1| | 2e-46 | PREDICTED: probable aquaporin SIP2-1 [Nicotiana tomentosiformis] | 655 | 009350 (14) | ref|XP_011040686.1| | 257 | PREDICTED: probable aquaporin SIP2-1 isoform X1 [Populus euphratica] |
JMFN018K05 | Sequence | 594 | 009350 (14) | ref|XP_006481985.1| | 6e-60 | PREDICTED: probable aquaporin SIP2-1-like [Citrus sinensis] | |||||
JMSF025J05 | Sequence | 678 | 009350 (14) | ref|XP_006481985.1| | 4e-72 | PREDICTED: probable aquaporin SIP2-1-like [Citrus sinensis] | 672 | 009350 (14) | ref|XP_002322583.1| | 3e-94 | aquaporin SIP2.1 family protein [Populus trichocarpa] gb|EEF04344.1| aquaporin S |
JMSF027B14 | Sequence | 669 | 009350 (14) | ref|XP_006481985.1| | 3e-72 | PREDICTED: probable aquaporin SIP2-1-like [Citrus sinensis] | 718 | 009350 (14) | ref|XP_002322583.1| | 2e-96 | aquaporin SIP2.1 family protein [Populus trichocarpa] gb|EEF04344.1| aquaporin S |
JMSF052P16 | Sequence | 701 | 009350 (14) | ref|XP_006430443.1| | 3e-80 | hypothetical protein CICLE_v10012628mg [Citrus clementina] gb|ESR43683.1| hypoth | 768 | 009350 (14) | ref|XP_002322583.1| | 5e-96 | aquaporin SIP2.1 family protein [Populus trichocarpa] gb|EEF04344.1| aquaporin S |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009350============================================1040 10 --------------------------------------------->JMFF022H07 <----------------------------------------------------------rJMFF022H07 13 ------------------------------------------------->JMFF026C07 <--------------------------------------------------------------rJMFF026C07 13 -------------------------------------------------------->JMFF016C06 <--------------------------------------------------------------rJMFF016C06 33 ---------------------------------------------------------------->JMSF025J05 <----------------------------------------------------------------rJMSF025J05 38 ------------------------------------------------------------------>JMSF052P16 <-------------------------------------------------------------------------rJMSF052P16 44 --------------------------------------------------------------->JMSF027B14 <--------------------------------------------------------------------rJMSF027B14
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------->JMSF024E04* -------------------------------------------------------->JMFN018K05-