List of clones in pair P013173.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017O11Sequence536005507 (14)ref|XP_008218676.1|2e-07PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Prunus mume]807005507 (14)ref|XP_009611099.1|3e-99PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMFF042K10Sequence659005507 (14)ref|XP_007205483.1|4e-27hypothetical protein PRUPE_ppa008150mg [Prunus persica] gb|EMJ06682.1| hypotheti602005507 (14)ref|XP_009611099.1|2e-60PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMFF043M18Sequence633005507 (14)ref|XP_007205483.1|5e-25hypothetical protein PRUPE_ppa008150mg [Prunus persica] gb|EMJ06682.1| hypotheti577005507 (14)ref|XP_009611099.1|9e-54PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF035A12Sequence726005507 (14)ref|XP_009611099.1|2e-49PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]774005507 (14)ref|XP_009611099.1|1e-98PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF036D11Sequence690005507 (14)ref|XP_009611099.1|5e-46PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]660005507 (14)ref|XP_009611099.1|4e-86PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF044D05Sequence848005507 (14)ref|XP_009611099.1|5e-98PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]707005507 (14)ref|XP_009611099.1|1e-94PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF048G22Sequence694005507 (14)ref|XP_009611099.1|4e-46PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]775005507 (14)ref|XP_009611099.1|2e-99PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]

Contig 5507 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005507============================================1599         
   1 --------------------------------------->JMFF043M18                                                               
                                                                     <-----------------------------------rJMFF043M18  
   1 ---------------------------------------->JMFF042K10                                                              
                                                                   <-------------------------------------rJMFF042K10  
  14 --------------------------------->JMFF017O11                                                                     
                                                      <-------------------------------------------------rJMFF017O11  
  85    -------------------------------------------->JMSF035A12                                                       
                                                      <-----------------------------------------------rJMSF035A12  
 116      ------------------------------------------>JMSF036D11                                                       
                                                             <----------------------------------------rJMSF036D11  
 116      ------------------------------------------>JMSF048G22                                                       
                                                      <-----------------------------------------------rJMSF048G22  
 275               ---------------------------------------------------->JMSF044D05                                    
                                                          <-------------------------------------------rJMSF044D05

The following clones don't have the opposite end in this pair.