clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003O07 | Sequence | 520 | 009464 (20) | ref|XP_009613625.1| | 149 | PREDICTED: uncharacterized protein LOC104106724 [Nicotiana tomentosiformis] | 774 | 009464 (20) | ref|XP_009774611.1| | 309 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] |
JMFF020P01 | Sequence | 466 | 009464 (20) | ref|XP_009613625.1| | 85.9 | PREDICTED: uncharacterized protein LOC104106724 [Nicotiana tomentosiformis] | 696 | 009464 (20) | ref|XP_009774611.1| | 308 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] |
JMFF027F01 | Sequence | 459 | 009464 (20) | ref|XP_009774611.1| | 84.0 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | 721 | 009464 (20) | ref|XP_009774611.1| | 308 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] |
JMFF040I04 | Sequence | 462 | 009464 (20) | ref|XP_009613625.1| | 85.9 | PREDICTED: uncharacterized protein LOC104106724 [Nicotiana tomentosiformis] | 621 | 009464 (20) | ref|XP_002524363.1| | 3e-97 | transcription factor, putative [Ricinus communis] gb|EEF37974.1| transcription f |
JMFF043I20 | Sequence | 633 | 009464 (20) | ref|XP_009774611.1| | 201 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | 616 | 009464 (20) | ref|XP_003635074.1| | 265 | PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera] |
JMFF046H05 | Sequence | 535 | 009464 (20) | ref|XP_002524363.1| | 4e-69 | transcription factor, putative [Ricinus communis] gb|EEF37974.1| transcription f | 331 | 009464 (20) | |||
JMFN030L05 | Sequence | 615 | 009464 (20) | ref|XP_009774611.1| | 245 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | |||||
JMFN041B09 | Sequence | 608 | 009464 (20) | ref|XP_009774611.1| | 258 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | |||||
JMSF002H07 | Sequence | 400 | 009464 (20) | ref|XP_009774611.1| | 189 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | 701 | 009464 (20) | ref|XP_006359214.1| | 300 | PREDICTED: uncharacterized protein LOC102591394 [Solanum tuberosum] |
JMSF010J08 | Sequence | 257 | 009464 (20) | 756 | 009464 (20) | ref|XP_002524363.1| | 1e-98 | transcription factor, putative [Ricinus communis] gb|EEF37974.1| transcription f | |||
JMSF037F09 | Sequence | 668 | 009464 (20) | ref|XP_009774611.1| | 146 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] | 743 | 009464 (20) | ref|XP_009774611.1| | 308 | PREDICTED: uncharacterized protein LOC104224625 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009464============================================1107 55 ---------------------->JMSF010J08 <-------------------------------------------------------------------rJMSF010J08 148 ---------------------------------------->JMFF027F01 <---------------------------------------------------------------rJMFF027F01 151 ----------------------------------------------------------->JMSF037F09 <------------------------------------------------------------------rJMSF037F09 161 ----------------------------------------->JMFF020P01 <--------------------------------------------------------------rJMFF020P01 164 ----------------------------------------->JMFF040I04 <-------------------------------------------------------rJMFF040I04 171 ---------------------------------------------->JMFF003O07 <---------------------------------------------------------------------rJMFF003O07 294 -------------------------------------------------------->JMFF043I20 <-----------------------------------rJMFF043I20 404 ----------------------------------->JMSF002H07 <---------------------------------------------------------------rJMSF002H07 503 ---------------------------------------------->JMFF046H05 <-----------------------------rJMFF046H05
The following clones don't have the opposite end in this pair.
------------------------------------------------------->JMFN030L05- ------------------------------------------------------>JMFN041B09-