clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015I14 | Sequence | 575 | 005952 (12) | ref|XP_009603662.1| | 2e-105 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | 668 | 005952 (12) | ref|XP_009603662.1| | 2e-77 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ |
JMFF018M16 | Sequence | 568 | 005952 (12) | ref|XP_009603662.1| | 3e-99 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | 782 | 005952 (12) | ref|XP_009603662.1| | 7e-138 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ |
JMFF027C01 | Sequence | 571 | 005952 (12) | ref|XP_009603662.1| | 1e-99 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | 727 | 005952 (12) | ref|XP_009603662.1| | 2e-124 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ |
JMFF041G08 | Sequence | 636 | 005952 (12) | ref|XP_009603662.1| | 3e-133 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | 607 | 005952 (12) | ref|XP_009603662.1| | 3e-86 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ |
JMFN016K02 | Sequence | 612 | 005952 (12) | ref|XP_009603662.1| | 5e-131 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | |||||
JMFN040H09 | Sequence | 625 | 005952 (12) | ref|XP_009603662.1| | 2e-128 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ | |||||
JMFS135D09 | Sequence | 598 | 005952 (12) | ref|XP_009603662.1| | 2e-114 | PREDICTED: proteasome subunit alpha type-2-A [Nicotiana tomentosiformis] ref|XP_ |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005952============================================1040 25 ------------------------------------------------------>JMFF018M16 <--------------------------------------------------------------------------rJMFF018M16 25 ------------------------------------------------------>JMFF027C01 <---------------------------------------------------------------------rJMFF027C01 61 ---------------------------------------------------->JMFF015I14 <---------------------------------------------------------------rJMFF015I14 63 ------------------------------------------------------------>JMFF041G08 <---------------------------------------------------------rJMFF041G08
The following clones don't have the opposite end in this pair.
--------------------------------------------------------->JMFS135D09- ----------------------------------------------------------->JMFN040H09- <-----------------------rJMSF023H02* ---------------------------------------------------------->JMFN016K02-