clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004N17 | Sequence | 542 | 013763 (14) | ref|XP_006447228.1| | 1e-58 | hypothetical protein CICLE_v10017101mg [Citrus clementina] ref|XP_006469913.1| P | 737 | 013763 (14) | gb|KDP24090.1| | 4e-46 | hypothetical protein JCGZ_25747 [Jatropha curcas] |
JMFF021B19 | Sequence | 444 | 013763 (14) | ref|XP_004248177.1| | 3e-40 | PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum] | 734 | 013763 (14) | gb|KDP21003.1| | 4e-45 | hypothetical protein JCGZ_21474 [Jatropha curcas] |
JMFF031D03 | Sequence | 542 | 013763 (14) | ref|XP_006447228.1| | 1e-58 | hypothetical protein CICLE_v10017101mg [Citrus clementina] ref|XP_006469913.1| P | 781 | 013763 (14) | gb|KDP21003.1| | 8e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] |
JMFF035N09 | Sequence | 559 | 013763 (14) | gb|KDP21003.1| | 1e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] | 709 | 013763 (14) | gb|KDP21003.1| | 4e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] |
JMFF041C24 | Sequence | 635 | 013763 (14) | gb|KDP21003.1| | 2e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] | 629 | 013763 (14) | gb|KDP24090.1| | 9e-38 | hypothetical protein JCGZ_25747 [Jatropha curcas] |
JMFF044K04 | Sequence | 641 | 013763 (14) | gb|KDP21003.1| | 2e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] | 608 | 013763 (14) | ref|XP_006348820.1| | 2e-40 | PREDICTED: uncharacterized protein At4g28440-like [Solanum tuberosum] |
JMFF047J06 | Sequence | 592 | 013763 (14) | gb|KDP21003.1| | 1e-47 | hypothetical protein JCGZ_21474 [Jatropha curcas] | 354 | 013763 (14) |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013763============================================ 870 14 ------------------------------------------------------------->JMFF004N17 <------------------------------------------------------------------------------------rJMFF004N17 48 ------------------------------------------------------------->JMFF031D03 <---------------------------------------------------------------------------------------rJMFF031D03 48 ------------------------------------------------------------------------->JMFF044K04 <------------------------------------------------------------------rJMFF044K04 57 ------------------------------------------------------------------------>JMFF041C24 <---------------------------------------------------------------------rJMFF041C24 65 ------------------------------------------------------------------->JMFF047J06 <---------------------------------------rJMFF047J06 90 -------------------------------------------------->JMFF021B19 <----------------------------------------------------------------------------------rJMFF021B19 173 --------------------------------------------------------------->JMFF035N09 <---------------------------------------------------------------------------------rJMFF035N09
The following clones don't have the opposite end in this pair.