List of clones in pair P013098.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A11Sequence366006685 (25)emb|CAL46265.1|2e-83beta-tubulin 6 [Oryza sativa Indica Group]739006685 (25)gb|ACF83522.1|5e-111unknown [Zea mays]
JMFF011E09Sequence484006685 (25)emb|CBI32808.3|4e-98unnamed protein product [Vitis vinifera]709006685 (25)gb|ACF83522.1|6e-102unknown [Zea mays]
JMFF011E14Sequence475006685 (25)emb|CBI32808.3|5e-83unnamed protein product [Vitis vinifera]665006685 (25)gb|ACF83522.1|6e-79unknown [Zea mays]
JMFF014F14Sequence574006685 (25)ref|XP_009404699.1|1e-70PREDICTED: tubulin beta-1 chain [Musa acuminata subsp. malaccensis]684006685 (25)gb|ACF83522.1|8e-103unknown [Zea mays]
JMFF014J15Sequence575006685 (25)ref|XP_009404699.1|1e-69PREDICTED: tubulin beta-1 chain [Musa acuminata subsp. malaccensis]725006685 (25)gb|ACF83522.1|1e-85unknown [Zea mays]
JMFF047I09Sequence519006685 (25)emb|CDP06213.1|1e-72unnamed protein product [Coffea canephora]430006685 (25)ref|XP_008637427.1|3e-04PREDICTED: tubulin beta-3 chain [Corvus brachyrhynchos]
JMFN028M04Sequence637006685 (25)ref|XP_006387233.1|1e-70hypothetical protein POPTR_1455s00210g [Populus trichocarpa] gb|ERP46147.1| hypo
JMFS046D04Sequence619006685 (25)ref|XP_010495405.1|1e-131PREDICTED: tubulin beta-8 chain-like, partial [Camelina sativa]
JMFS053D09Sequence457006685 (25)gb|ACR37087.1|2e-28unknown [Zea mays]
JMFS054E06Sequence607006685 (25)emb|CBI32808.3|3e-111unnamed protein product [Vitis vinifera]
JMFS074A01Sequence627006685 (25)emb|CBI32808.3|2e-125unnamed protein product [Vitis vinifera]
JMSF008M10Sequence319006685 (25)emb|CBI32808.3|6e-42unnamed protein product [Vitis vinifera]786006685 (25)gb|ACF83522.1|7e-97unknown [Zea mays]
JMSF011N16Sequence243006685 (25)tpg|DAA57202.1|4e-21TPA: beta tubulin6 [Zea mays]770006685 (25)gb|EEE55549.1|3e-130hypothetical protein OsJ_03802 [Oryza sativa Japonica Group]
JMSF036G17Sequence685006685 (25)emb|CBI32808.3|3e-125unnamed protein product [Vitis vinifera]710006685 (25)gb|ACF83522.1|1e-99unknown [Zea mays]
JMSF044A22Sequence720006685 (25)emb|CBI32808.3|4e-125unnamed protein product [Vitis vinifera]746006685 (25)gb|ACF83522.1|6e-107unknown [Zea mays]

Contig 6685 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006685============================================1811         
  38   ----------------->JMSF008M10                                                                                   
                                                              <------------------------------------------rJMSF008M10  
  82   --------------------------->JMFF047I09                                                                         
                                                                                 <---------------------rJMFF047I09  
  82   ------------------------------->JMFF014J15                                                                     
                                                                <--------------------------------------rJMFF014J15  
  85 --------------------------------------->JMSF044A22                                                               
                                                            <----------------------------------------rJMSF044A22  
  91   ------------------------->JMFF011E14                                                                           
                                                                 <------------------------------------rJMFF011E14  
 124   ------------------------------------>JMSF036G17                                                                
                                                             <--------------------------------------rJMSF036G17  
 161   ------------------------------->JMFF014F14                                                                     
                                                            <-------------------------------------rJMFF014F14  
 182   ----------->JMSF011N16                                                                                         
                                                        <----------------------------------------rJMSF011N16  
 271           ------------------->JMFF003A11                                                                         
                                                           <----------------------------------------rJMFF003A11  
 273           ------------------------->JMFF011E09                                                                   
                                                             <--------------------------------------rJMFF011E09

The following clones don't have the opposite end in this pair.

        --------------------------------->JMFS054E06-                                                                 
                                                                            ------------------------>JMFS053D09-      
        ---------------------------------->JMFS074A01-                                                                
                              --------------------------------->JMFS046D04-                                           
                                                                   ---------------------------------->JMFN028M04-