clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF013B13 | Sequence | 499 | 002036 (20) | ref|XP_006343311.1| | 140 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFF018N03 | Sequence | 264 | 002036 (20) | ||||||||
JMFF038O15 | Sequence | 578 | 002036 (20) | ref|XP_006343311.1| | 122 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | 627 | 002036 (20) | ref|XP_006343311.1| | 137 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] |
JMFF045N06 | Sequence | 609 | 002036 (20) | ref|XP_004234498.1| | 138 | PREDICTED: uncharacterized protein LOC101259916 [Solanum lycopersicum] | 576 | 002036 (20) | ref|XP_006343311.1| | 126 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] |
JMFF051F09 | Sequence | 599 | 002036 (20) | ref|XP_006343311.1| | 122 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | 510 | 002036 (20) | ref|XP_006343311.1| | 129 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] |
JMFN003F18 | Sequence | 601 | 002036 (20) | ref|XP_006343311.1| | 118 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFN009L08 | Sequence | 615 | 002036 (20) | ref|XP_006343311.1| | 124 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFN009L10 | Sequence | 594 | 002036 (20) | ref|XP_006343311.1| | 123 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFN010P09 | Sequence | 609 | 002036 (20) | ref|XP_006343311.1| | 123 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFN019F14 | Sequence | 547 | 002036 (20) | ref|XP_006343311.1| | 107 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMFN030H15 | Sequence | 643 | 002036 (20) | ref|XP_006343311.1| | 131 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||||
JMSF001E09 | Sequence | 439 | 002036 (20) | 664 | 002036 (20) | ref|XP_006343311.1| | 149 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||
JMSF001E15 | Sequence | 220 | 002036 (20) | 626 | 002036 (20) | ref|XP_006343311.1| | 152 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] | |||
JMSF016D17 | Sequence | 518 | 002036 (20) | ref|XP_004234498.1| | 78.6 | PREDICTED: uncharacterized protein LOC101259916 [Solanum lycopersicum] | 677 | 002036 (20) | ref|XP_006343311.1| | 150 | PREDICTED: uncharacterized protein LOC102597380 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002036============================================ 908 5 ------------------------------------------------------------------>JMFF045N06 <--------------------------------------------------------------rJMFF045N06 34 ----------------------------------------------------------------->JMFF051F09 <-------------------------------------------------------rJMFF051F09 59 --------------------------------------------------------------->JMFF038O15 <--------------------------------------------------------------------rJMFF038O15 70 -------------------------------------------------------->JMSF016D17 <------------------------------------------------------------------------rJMSF016D17 84 ----------------------------------------------->JMSF001E09 <------------------------------------------------------------------------rJMSF001E09 113 ----------------------->JMSF001E15 <--------------------------------------------------------------------rJMSF001E15
The following clones don't have the opposite end in this pair.
---------------------------------------------------------->JMFN019F14- ---------------------------------------------------------------------->JMFN030H15- ------------------------------------------------------------------>JMFN010P09- <-----------------------------------------------------rJMFF013B13- ----------------------------------------------------------------->JMFN003F18- ---------------------------->JMFF018N03- ------------------------------------------------------------------>JMFN009L08- ---------------------------------------------------------------->JMFN009L10-