clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004B08 | Sequence | 512 | 007908 (14) | ref|XP_009764234.1| | 186 | PREDICTED: uncharacterized protein LOC104215980 [Nicotiana sylvestris] | |||||
JMFF037B18 | Sequence | 605 | 007908 (14) | ref|XP_009764234.1| | 251 | PREDICTED: uncharacterized protein LOC104215980 [Nicotiana sylvestris] | 779 | 007908 (14) | ref|XP_006341084.1| | 422 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] |
JMFN008G13 | Sequence | 610 | 007908 (14) | ref|XP_006341084.1| | 301 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | |||||
JMFN010A16 | Sequence | 620 | 007908 (14) | ref|XP_006341084.1| | 297 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | |||||
JMFS129E08 | Sequence | 619 | 007908 (14) | ref|XP_006341084.1| | 270 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | |||||
JMSF008C05 | Sequence | 322 | 007908 (14) | ref|XP_002308463.2| | 3e-15 | hypothetical protein POPTR_0006s22700g [Populus trichocarpa] gb|EEE91986.2| hypo | 762 | 007908 (14) | ref|XP_006341084.1| | 421 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] |
JMSF026C24 | Sequence | 590 | 007908 (14) | ref|XP_006341084.1| | 203 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | 691 | 007908 (14) | ref|XP_006341084.1| | 401 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] |
JMSF030H03 | Sequence | 647 | 007908 (14) | ref|XP_006341084.1| | 276 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | 776 | 007908 (14) | ref|XP_006341084.1| | 430 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] |
JMSF045H12 | Sequence | 794 | 007908 (14) | ref|XP_006341084.1| | 369 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] | 878 | 007908 (14) | ref|XP_006341084.1| | 424 | PREDICTED: uncharacterized protein LOC102594717 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007908============================================1136 52 --------------------------------------------------------------------->JMSF045H12 <-------------------------------------------------------------------------rJMSF045H12 110 --------------------------------------------------->JMSF026C24 <------------------------------------------------------------rJMSF026C24 116 ---------------------------------------------------->JMFF037B18 <--------------------------------------------------------------------rJMFF037B18 124 --------------------------->JMSF008C05 <------------------------------------------------------------------rJMSF008C05 135 -------------------------------------------------------->JMSF030H03 <-------------------------------------------------------------------rJMSF030H03
The following clones don't have the opposite end in this pair.
----------------------------------------------------->JMFN010A16- -------------------------------------------->JMFF004B08- ----------------------------------------------------->JMFN008G13- ----------------------------------------------------->JMFS129E08-