clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF034D10 | Sequence | 578 | 011114 (11) | ref|XP_009790978.1| | 271 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] | 325 | 011114 (11) | |||
JMSF012B04 | Sequence | 281 | 011114 (11) | ref|XP_009790978.1| | 81.6 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] | 799 | 011114 (11) | ref|XP_009790978.1| | 358 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] |
JMSF014J21 | Sequence | 228 | 011114 (11) | 797 | 011114 (11) | ref|XP_009790978.1| | 334 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] | |||
JMSF014K21 | Sequence | 718 | 011114 (11) | gb|AFK46755.1| | 6e-87 | unknown [Lotus japonicus] | |||||
JMSF019B24 | Sequence | 271 | 011114 (11) | ref|XP_009790978.1| | 106 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] | 756 | 011114 (11) | ref|XP_009790978.1| | 185 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] |
JMSF021N22 | Sequence | 691 | 011114 (11) | ref|XP_009790978.1| | 378 | PREDICTED: uncharacterized protein LOC104238346 [Nicotiana sylvestris] | 800 | 011114 (11) | gb|AFK44747.1| | 2e-94 | unknown [Medicago truncatula] gb|KEH38855.1| DnaJ heat shock amino-terminal doma |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011114============================================1433 40 --------------->JMSF014J21 <-------------------------------------------------------rJMSF014J21 147 --------------------------------------->JMFF034D10 <---------------------rJMFF034D10 228 ------------------->JMSF012B04 <------------------------------------------------------rJMSF012B04 231 ----------------------------------------------->JMSF021N22 <------------------------------------------------------rJMSF021N22 238 ----------------->JMSF019B24 <--------------------------------------------------rJMSF019B24
The following clones don't have the opposite end in this pair.
<-----------------------------------------------rJMSF014K21-