| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFN032F11 | Sequence | 589 | 003746 (18) | gb|KJB31128.1| | 4e-49 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | |||||
| JMFS071H01 | Sequence | 612 | 003746 (18) | gb|KJB31128.1| | 7e-49 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | |||||
| JMFS096H01 | Sequence | 597 | 003746 (18) | gb|KJB31128.1| | 4e-49 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | |||||
| JMSF009C02 | Sequence | 363 | 003746 (18) | gb|KJB31128.1| | 7e-38 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | 715 | 003746 (18) | ref|XP_004135273.1| | 90.1 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
| JMSF013L11 | Sequence | 508 | 003746 (18) | gb|KJB31128.1| | 3e-49 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | 702 | 003746 (18) | ref|XP_004135273.1| | 81.3 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
| JMSF014J03 | Sequence | 250 | 003746 (18) | ref|XP_010044569.1| | 2e-15 | PREDICTED: uncharacterized protein LOC104433500 isoform X2 [Eucalyptus grandis] | 717 | 003746 (18) | ref|XP_004135273.1| | 88.2 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
| JMSF015B11 | Sequence | 437 | 003746 (18) | gb|KJB31128.1| | 1e-52 | hypothetical protein B456_005G178300 [Gossypium raimondii] gb|KJB31129.1| hypoth | 767 | 003746 (18) | ref|XP_004135273.1| | 105 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
| JMSF032C24 | Sequence | 688 | 003746 (18) | ref|XP_004135273.1| | 174 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 | 548 | 003746 (18) | |||
| JMSF033C24 | Sequence | 120 | 003746 (18) | ||||||||
| JMSF037B01 | Sequence | 684 | 003746 (18) | ref|XP_004135273.1| | 174 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 | 717 | 003746 (18) | ref|XP_004135273.1| | 90.1 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
| JMSF052K04 | Sequence | 704 | 003746 (18) | ref|XP_004135273.1| | 189 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 | 927 | 003746 (18) | ref|XP_004135273.1| | 189 | PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus] ref|XP_0041553 |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig003746============================================1047 2 ----------------------------------------->JMSF015B11 <------------------------------------------------------------------------rJMSF015B11 15 ----------------------------------------------------------------->JMSF032C24 <---------------------------------------------------rJMSF032C24 16 ------------------------------------------------>JMSF013L11 <------------------------------------------------------------------rJMSF013L11 16 ---------------------------------------------------------------->JMSF037B01 <-------------------------------------------------------------------rJMSF037B01 17 ----------------------->JMSF014J03 <-------------------------------------------------------------------rJMSF014J03 17 --------------------------------->JMSF009C02 <-------------------------------------------------------------------rJMSF009C02 56 ------------------------------------------------------------------>JMSF052K04 <----------------------------------------------------------------------------------------rJMSF052K04
The following clones don't have the opposite end in this pair.
---------->JMSF033C24- -------------------------------------------------------->JMFS096H01- ------------------------------------------------------->JMFN032F11- --------------------------------------------------------->JMFS071H01-