List of clones in pair P012864.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008K17Sequence593012000 (51)ref|XP_009619432.1|6e-115PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas726012000 (51)gb|AAF26735.1|1e-135methionine synthase [Coffea arabica]
JMFF010P14Sequence565012000 (51)gb|KDO54954.1|4e-93hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]735012000 (51)gb|AAF26735.1|1e-134methionine synthase [Coffea arabica]
JMFF012J02Sequence528012000 (51)ref|XP_009619432.1|6e-98PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas735012000 (51)gb|AAF26735.1|1e-135methionine synthase [Coffea arabica]
JMFF014N15Sequence534012000 (51)gb|KDO54954.1|4e-97hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]728012000 (51)gb|AAF26735.1|1e-135methionine synthase [Coffea arabica]
JMFF028P04Sequence503012000 (51)ref|XP_009619432.1|3e-91PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas682012000 (51)gb|AAF26735.1|8e-122methionine synthase [Coffea arabica]
JMFF030F23Sequence502012000 (51)ref|XP_009619432.1|3e-91PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas663012000 (51)gb|AAF26735.1|2e-117methionine synthase [Coffea arabica]
JMFF036E15Sequence516012000 (51)gb|KDO54954.1|1e-92hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]555012000 (51)gb|AAF26735.1|3e-92methionine synthase [Coffea arabica]
JMFF045D22Sequence632012000 (51)gb|KJB80760.1|2e-117hypothetical protein B456_013G114400 [Gossypium raimondii]530012000 (51)gb|ACF88327.1|7e-77unknown [Zea mays]
JMFF045F08Sequence633012000 (51)gb|KDO54954.1|3e-111hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]610012000 (51)gb|AAF26735.1|1e-97methionine synthase [Coffea arabica]
JMFN004M02Sequence655012000 (51)gb|AAF26735.1|4e-139methionine synthase [Coffea arabica]
JMFN005L14Sequence603012000 (51)gb|ABI35986.1|3e-134methionine synthase [Orobanche ramosa]
JMFN006E21Sequence534012000 (51)gb|AAF26735.1|3e-78methionine synthase [Coffea arabica]
JMFN039F01Sequence612012000 (51)gb|AAF26735.1|1e-117methionine synthase [Coffea arabica]
JMFS024F03Sequence637012000 (51)gb|KDO54954.1|1e-120hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]
JMFS028H03Sequence623012000 (51)ref|XP_004291976.1|5e-123PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas
JMFS029H10Sequence623012000 (51)ref|XP_006443468.1|1e-142hypothetical protein CICLE_v10018965mg [Citrus clementina] gb|ESR56708.1| hypoth
JMFS049E10Sequence604012000 (51)tpg|DAA47596.1|1e-115TPA: putative methionine synthase family protein [Zea mays]
JMFS051G12Sequence596012000 (51)gb|KJB80760.1|2e-124hypothetical protein B456_013G114400 [Gossypium raimondii]
JMFS054A07Sequence623012000 (51)gb|KJB80760.1|8e-119hypothetical protein B456_013G114400 [Gossypium raimondii]
JMFS060C04Sequence627012000 (51)ref|XP_006443468.1|2e-144hypothetical protein CICLE_v10018965mg [Citrus clementina] gb|ESR56708.1| hypoth
JMFS065G08Sequence639012000 (51)gb|AAF26735.1|1e-132methionine synthase [Coffea arabica]
JMFS067C11Sequence627012000 (51)gb|KCW47762.1|3e-129hypothetical protein EUGRSUZ_K015081, partial [Eucalyptus grandis]
JMFS076H07Sequence526012000 (51)gb|AAF26735.1|1e-75methionine synthase [Coffea arabica]
JMFS115B03Sequence557012000 (51)tpg|DAA47596.1|5e-115TPA: putative methionine synthase family protein [Zea mays]
JMFS138E09Sequence621012000 (51)ref|XP_009804811.1|1e-116PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferas
JMSF003L18Sequence392012000 (51)tpg|DAA47597.1|8e-61TPA: putative methionine synthase family protein [Zea mays]720012000 (51)gb|AAF26735.1|9e-136methionine synthase [Coffea arabica]
JMSF009E03Sequence378012000 (51)tpg|DAA47597.1|4e-57TPA: putative methionine synthase family protein [Zea mays]724012000 (51)gb|AAF26735.1|9e-136methionine synthase [Coffea arabica]
JMSF013I01Sequence414012000 (51)tpg|DAA47597.1|1e-66TPA: putative methionine synthase family protein [Zea mays]737012000 (51)gb|AAF26735.1|1e-138methionine synthase [Coffea arabica]
JMSF019F05Sequence581012000 (51)tpg|DAA47596.1|1e-106TPA: putative methionine synthase family protein [Zea mays]715012000 (51)gb|AAF26735.1|4e-134methionine synthase [Coffea arabica]
JMSF020N12Sequence661012000 (51)gb|KDO54954.1|5e-123hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]769012000 (51)gb|AAF26735.1|2e-147methionine synthase [Coffea arabica]
JMSF022E22Sequence636012000 (51)gb|KJB80760.1|2e-117hypothetical protein B456_013G114400 [Gossypium raimondii]722012000 (51)gb|AAF26735.1|9e-136methionine synthase [Coffea arabica]
JMSF028O02Sequence641012000 (51)gb|KJB80760.1|2e-118hypothetical protein B456_013G114400 [Gossypium raimondii]758012000 (51)gb|AAF26735.1|1e-146methionine synthase [Coffea arabica]
JMSF032P22Sequence693012000 (51)gb|KCW47762.1|3e-105hypothetical protein EUGRSUZ_K015081, partial [Eucalyptus grandis]692012000 (51)gb|AAF26735.1|1e-127methionine synthase [Coffea arabica]
JMSF037H18Sequence713012000 (51)gb|KJB80760.1|4e-134hypothetical protein B456_013G114400 [Gossypium raimondii]

Contig 12000 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012000============================================2547         
  19 ------------------->JMFF036E15                                                                                   
                                                                                   <---------------------rJMFF036E15  
  25 -------------------->JMFF014N15                                                                                  
                                                                            <----------------------------rJMFF014N15  
  27 ------------------------->JMSF020N12                                                                             
                                                                          <-----------------------------rJMSF020N12  
  30 -------------->JMSF009E03                                                                                        
                                                                            <---------------------------rJMSF009E03  
  30 --------------->JMSF013I01                                                                                       
                                                                           <----------------------------rJMSF013I01  
  31 -------------->JMSF003L18                                                                                        
                                                                            <---------------------------rJMSF003L18  
  31 ---------------------->JMSF019F05                                                                                
                                                                            <---------------------------rJMSF019F05  
  33 ------------------------>JMSF028O02                                                                              
                                                                          <-----------------------------rJMSF028O02  
  51 ------------------------>JMSF022E22                                                                              
                                                                            <--------------------------rJMSF022E22  
 101     ---------------->JMFF010P14                                                                                  
                                                                            <----------------------------rJMFF010P14  
 163 ---------------------->JMFF045F08                                                                                
                                                                                  <----------------rJMFF045F08  
 167 ------------------------>JMFF045D22                                                                              
                                                                                     <-------------rJMFF045D22  
 493                   -------------------->JMSF032P22                                                                
                                                                             <--------------------------rJMSF032P22  
 874                                   ------------------->JMFF028P04                                                 
                                                                              <--------------------------rJMFF028P04  
 875                                   ------------------->JMFF012J02                                                 
                                                                            <----------------------------rJMFF012J02  
 875                                   ------------------->JMFF030F23                                                 
                                                                              <-------------------------rJMFF030F23  
 884                                   ---------------------->JMFF008K17                                              
                                                                            <----------------------------rJMFF008K17

The following clones don't have the opposite end in this pair.

     --------------------------->JMSF037H18-                                                                          
                                                                                     ------------->JMFN006E21-        
                                                                                    -------------------->JMFS076H07-  
                                                              ------------------------>JMFS060C04-                    
      ----------------------->JMFS054A07-                                                                             
                                                                           ------------------------>JMFN004M02-       
                                                         ----------------------->JMFN005L14-                          
                    ------------------------>JMFS067C11-                                                              
                                          ----------------------->JMFS028H03-                                         
      ------------------------>JMFS024F03-                                                                            
       --------------------->JMFS115B03-                                                                              
         ---------------------->JMFS051G12-                                                                           
                                                                               ----------------------->JMFN039F01-    
                           ----------------------->JMFS138E09-                                                        
      ----------------------->JMFS049E10-                                                                             
                                                              ----------------------->JMFS029H10-                     
                                                                            ------------------------>JMFS065G08-