clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF021C02 | Sequence | 490 | 005964 (7) | ref|XP_004243516.1| | 5e-56 | PREDICTED: small ubiquitin-related modifier 1 [Solanum lycopersicum] | 483 | 005964 (7) | ref|XP_004243516.1| | 5e-56 | PREDICTED: small ubiquitin-related modifier 1 [Solanum lycopersicum] |
JMFN037E24 | Sequence | 507 | 005964 (7) | ref|XP_004243516.1| | 6e-56 | PREDICTED: small ubiquitin-related modifier 1 [Solanum lycopersicum] | |||||
JMSF005H23 | Sequence | 292 | 005964 (7) | emb|CDP11305.1| | 1e-35 | unnamed protein product [Coffea canephora] | 371 | 005964 (7) | ref|XP_010929803.1| | 8e-45 | PREDICTED: small ubiquitin-related modifier 2-like [Elaeis guineensis] |
JMSF032P01 | Sequence | 527 | 005964 (7) | ref|XP_004243516.1| | 8e-56 | PREDICTED: small ubiquitin-related modifier 1 [Solanum lycopersicum] | 476 | 005964 (7) | ref|XP_004243516.1| | 4e-56 | PREDICTED: small ubiquitin-related modifier 1 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005964============================================ 490 10 --------------------------------------------------------------------------------------------------->JMFF021C02 <-------------------------------------------------------------------------------------------------rJMFF021C02 138 -------------------------------------------------------------------------------->JMSF032P01 <-----------------------------------------------------------------------rJMSF032P01 146 ----------------------------->JMSF005H23 <-------------------------------------------------------------------rJMSF005H23
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------->JMFN037E24-