clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF022N11 | Sequence | 349 | 010339 (10) | ref|XP_008362409.1| | 87.4 | PREDICTED: uncharacterized protein LOC103426097 [Malus domestica] | 807 | 010339 (10) | ref|XP_009760893.1| | 203 | PREDICTED: uncharacterized protein LOC104213155 [Nicotiana sylvestris] |
JMFF042N09 | Sequence | 618 | 010339 (10) | emb|CDP15933.1| | 8e-76 | unnamed protein product [Coffea canephora] | 610 | 010339 (10) | ref|XP_004251802.1| | 165 | PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum] |
JMFF050N19 | Sequence | 602 | 010339 (10) | ref|XP_004251802.1| | 202 | PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum] | 560 | 010339 (10) | ref|XP_004251802.1| | 134 | PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum] |
JMSF016O17 | Sequence | 240 | 010339 (10) | ref|XP_010099390.1| | 2e-20 | hypothetical protein L484_004817 [Morus notabilis] gb|EXB78115.1| hypothetical p | 737 | 010339 (10) | ref|XP_006350028.1| | 224 | PREDICTED: uncharacterized protein LOC102599925 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010339============================================1423 1 ----------------------------------------->JMFF050N19 <--------------------------------------rJMFF050N19 30 ------------------------>JMFF022N11 <-------------------------------------------------------rJMFF022N11 64 ----------------------------------------->JMFF042N09 <------------------------------------------rJMFF042N09 97 ---------------->JMSF016O17 <---------------------------------------------------rJMSF016O17
The following clones don't have the opposite end in this pair.
----------------------------------->JMSF051J16* ----------->JMSF006P09*