List of clones in pair P012658.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F11Sequence463004439 (19)gb|KCW59529.1|1e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]411004439 (19)gb|KCW59529.1|8e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFF002B02Sequence581004439 (19)gb|KCW59529.1|3e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]587004439 (19)gb|KCW59529.1|6e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFF012A01Sequence458004439 (19)ref|XP_009628091.1|1e-21PREDICTED: uncharacterized protein At2g23090-like [Nicotiana tomentosiformis] r
JMFF015C20Sequence487004439 (19)gb|KCW59529.1|1e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN007K03Sequence463004439 (19)gb|KCW59529.1|9e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN008G15Sequence470004439 (19)gb|KCW59529.1|1e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN008O07Sequence510004439 (19)gb|KCW59529.1|2e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN009L22Sequence567004439 (19)gb|KCW59529.1|3e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN020C14Sequence502004439 (19)gb|KCW59529.1|2e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN028I14Sequence569004439 (19)gb|KCW59529.1|3e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN032B01Sequence465004439 (19)gb|KCW59529.1|9e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN032M15Sequence467004439 (19)gb|KCW59529.1|9e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFN045E07Sequence474004439 (19)gb|KCW59529.1|8e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFS056D05Sequence446004439 (19)gb|KCW59529.1|7e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMFS161F11Sequence527004439 (19)gb|KCW59529.1|2e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]
JMSF023J19Sequence510004439 (19)gb|KCW59529.1|1e-43hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]464004439 (19)gb|KCW59529.1|9e-44hypothetical protein EUGRSUZ_H02281, partial [Eucalyptus grandis]

Contig 4439 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004439============================================ 584         
  31 ------------------------------------------------------------------------------------------------->JMFF002B02     
                                      <-------------------------------------------------------------rJMFF002B02  
 137     ------------------------------------------------------------------------------------->JMSF023J19             
         <----------------------------------------------------------------------------rJMSF023J19  
 174     ------------------------------------------------------------------------------>JMFF001F11                    
         <---------------------------------------------------------------------rJMFF001F11

The following clones don't have the opposite end in this pair.

       -------------------------------------------------------------------------------->JMFN045E07-                   
      -------------------------------------------------------------------------------->JMFF015C20-                    
        ------------------------------------------------------------------------------------->JMFN020C14-             
        --------------------------------------------------------------------------------------->JMFN008O07-           
         ------------------------------------------------------------------------------>JMFN007K03-                   
      <-----------------------------------------------------------------------------rJMFF012A01-                      
         ------------------------------------------------------------------------------->JMFN032B01-                  
        ------------------------------------------------------------------------------->JMFN032M15-                   
         ---------------------------------------------------------------------------->JMFS056D05-                     
        ----------------------------------------------------------------------------------------->JMFS161F11-         
        -------------------------------------------------------------------------------->JMFN008G15-                  
        ------------------------------------------------------------------------------------------------>JMFN009L22-  
        ----------------------------------------------------------------------------------------------->JMFN028I14-