List of clones in pair P012644.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002E23Sequence543000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]229000269 (61)gb|AAD22104.1|8e-32B12D protein [Ipomoea batatas]
JMFF003N21Sequence511000269 (61)gb|AAD22104.1|3e-55B12D protein [Ipomoea batatas]540000269 (61)gb|AAD22104.1|6e-57B12D protein [Ipomoea batatas]
JMFF006B01Sequence528000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]578000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFF006O15Sequence586000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]562000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFF012C18Sequence597000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]572000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFF021P20Sequence464000269 (61)gb|AAD22104.1|5e-57B12D protein [Ipomoea batatas]568000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFF028H21Sequence529000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]555000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFF029C10Sequence539000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]571000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFF029K21Sequence510000269 (61)gb|AAD22104.1|7e-57B12D protein [Ipomoea batatas]
JMFF029K22Sequence510000269 (61)gb|AAD22104.1|7e-57B12D protein [Ipomoea batatas]516000269 (61)gb|AAD22104.1|3e-53B12D protein [Ipomoea batatas]
JMFF029L13Sequence483000269 (61)gb|AAD22104.1|5e-57B12D protein [Ipomoea batatas]418000269 (61)gb|AAD22104.1|1e-34B12D protein [Ipomoea batatas]
JMFF029L21Sequence485000269 (61)gb|AAD22104.1|5e-57B12D protein [Ipomoea batatas]518000269 (61)gb|AAD22104.1|4e-50B12D protein [Ipomoea batatas]
JMFF029L22Sequence557000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]418000269 (61)gb|AAD22104.1|1e-33B12D protein [Ipomoea batatas]
JMFF033N19Sequence566000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]574000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFF036H23Sequence541000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]671000269 (61)gb|AAD22104.1|3e-56B12D protein [Ipomoea batatas]
JMFF043M06Sequence634000269 (61)gb|AAD22104.1|5e-56B12D protein [Ipomoea batatas]609000269 (61)gb|AAD22104.1|1e-40B12D protein [Ipomoea batatas]
JMFF048D06Sequence450000269 (61)gb|AAD22104.1|3e-56B12D protein [Ipomoea batatas]398000269 (61)gb|AAD22104.1|8e-18B12D protein [Ipomoea batatas]
JMFF049A13Sequence505000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]449000269 (61)gb|AAD22104.1|2e-36B12D protein [Ipomoea batatas]
JMFN004B14Sequence524000269 (61)gb|AAD22104.1|3e-56B12D protein [Ipomoea batatas]
JMFN005P07Sequence563000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFN006H08Sequence557000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]
JMFN008J10Sequence562000269 (61)gb|AAD22104.1|3e-55B12D protein [Ipomoea batatas]
JMFN012F02Sequence542000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFN013F23Sequence587000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFN015K15Sequence557000269 (61)gb|AAD22104.1|8e-57B12D protein [Ipomoea batatas]
JMFN017B15Sequence543000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]
JMFN019P16Sequence469000269 (61)gb|AAD22104.1|3e-42B12D protein [Ipomoea batatas]
JMFN025M15Sequence516000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMFN030M23Sequence560000269 (61)gb|AAD22104.1|7e-57B12D protein [Ipomoea batatas]
JMFN032P13Sequence557000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]
JMFN033B10Sequence178000269 (61)gb|AAD22104.1|5e-26B12D protein [Ipomoea batatas]
JMFN038H01Sequence514000269 (61)gb|AAD22104.1|6e-57B12D protein [Ipomoea batatas]
JMFN039K09Sequence555000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]
JMFN042N18Sequence313000269 (61)gb|AAD22104.1|2e-47B12D protein [Ipomoea batatas]
JMFN043A21Sequence556000269 (61)gb|AAD22104.1|7e-57B12D protein [Ipomoea batatas]
JMFS167B10Sequence557000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]
JMSF048P21Sequence586000269 (61)gb|AAD22104.1|2e-56B12D protein [Ipomoea batatas]542000269 (61)gb|AAD22104.1|1e-56B12D protein [Ipomoea batatas]
JMSF049A18Sequence575000269 (61)gb|AAD22104.1|9e-57B12D protein [Ipomoea batatas]519000269 (61)gb|AAD22104.1|5e-57B12D protein [Ipomoea batatas]
JMSF049N15Sequence560000269 (61)gb|AAD22104.1|8e-57B12D protein [Ipomoea batatas]516000269 (61)gb|AAD22104.1|5e-57B12D protein [Ipomoea batatas]

Contig 269 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000269============================================ 734         
  11  ------------------------------------------------------------------------------>JMFF043M06                       
                      <----------------------------------------------------------------------------------rJMFF043M06  
  23 ------------------------------------------------------------------------->JMFF036H23                             
          <-------------------------------------------------------------------------------------------rJMFF036H23  
 132  -------------------------------------------------------------------->JMFF049A13                                 
                          <------------------------------------------------------------rJMFF049A13  
 154  ----------------------------------------------------------------------->JMFF006B01                              
      <------------------------------------------------------------------------------rJMFF006B01  
 158 ---------------------------------------------------------------------------->JMFF033N19                          
     <-----------------------------------------------------------------------------rJMFF033N19  
 159   --------------------------------------------------------->JMFF048D06                                           
                                    <------------------------------------------------rJMFF048D06  
 160 --------------------------------------------------------------------------------->JMFF012C18                     
     <-----------------------------------------------------------------------------rJMFF012C18  
 161 ------------------------------------------------------------------------->JMFF029C10                             
     <-----------------------------------------------------------------------------rJMFF029C10  
 164  -------------------------------------------------------------->JMFF021P20                                       
      <-----------------------------------------------------------------------------rJMFF021P20  
 170  ------------------------------------------------------------------------------>JMFF006O15                       
      <----------------------------------------------------------------------------rJMFF006O15  
 180   ----------------------------------------------------------------------->JMFF028H21                             
       <--------------------------------------------------------------------------rJMFF028H21  
 191  ------------------------------------------------------------------------------->JMSF048P21                      
      <-------------------------------------------------------------------------rJMSF048P21  
 192      --------------------------------------------------------------------->JMFF003N21                            
          <-------------------------------------------------------------------------rJMFF003N21  
 213      ---------------------------------------------------------------------------->JMSF049A18                     
          <----------------------------------------------------------------------rJMSF049A18  
 215         --------------------------------------------------------------------->JMFF029K22                         
             <----------------------------------------------------------------------rJMFF029K22  
 218      --------------------------------------------------------------------------->JMSF049N15                      
          <---------------------------------------------------------------------rJMSF049N15  
 224         ----------------------------------------------------------------->JMFF029L21                             
             <--------------------------------------------------------------------rJMFF029L21  
 281         ----------------------------------------------------------------->JMFF029L13                             
                 <--------------------------------------------------------rJMFF029L13  
 283         ------------------------------------------------------------------------->JMFF029L22                     
                 <--------------------------------------------------------rJMFF029L22  
 474         ------------------------------------------------------------------------->JMFF002E23                     
                 <------------------------------rJMFF002E23

The following clones don't have the opposite end in this pair.

         ---------------------------------------------------------------------------->JMFN005P07-                     
            --------------------------------------------------------------------------->JMFN043A21-                   
       --------------------------------------------------------------------->JMFN038H01-                              
                       --------------------------------------------------------------->JMFN019P16-                    
       ------------------------------------------------------------------------------->JMFN013F23-                    
         ------------------------------------------------------------------------>JMFN039K09-                         
            ----------------------->JMFN033B10-                                                                       
         ---------------------------------------------------------------------------->JMFN008J10-                     
             --------------------------------------------------------------------->JMFF029K21-                        
             ------------------------------------------------------------------------->JMFN012F02-                    
           ---------------------------------------------------------------------------->JMFN030M23-                   
        --------------------------------------------------------------------->JMFN004B14-                             
         --------------------------------------------------------------------------->JMFS167B10-                      
     ----------------------------------->JMFF048C06#                                                                  
           ------------------------------------------------------------------------->JMFN015K15-                      
           ------------------------------------------>JMFN042N18-                                                     
         --------------------------------------------------------------------------->JMFN006H08-                      
         --------------------------------------------------------------------------->JMFN032P13-                      
      <-----------------------------------------------------------------------rJMSF049P21*                            
                ----------------------------------------------------------------------->JMFN017B15-                   
              ---------------------------------------------------------------------->JMFN025M15-