List of clones in pair P012627.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M14Sequence562002445 (16)emb|CAD58628.1|5e-73SUI1 protein [Coffea arabica]617002445 (16)emb|CAD58628.1|9e-73SUI1 protein [Coffea arabica]
JMFF015A23Sequence534002445 (16)emb|CAD58628.1|2e-73SUI1 protein [Coffea arabica]700002445 (16)emb|CAD58628.1|1e-72SUI1 protein [Coffea arabica]
JMFF034P22Sequence501002445 (16)emb|CAD58628.1|1e-68SUI1 protein [Coffea arabica]
JMFN001A05Sequence626002445 (16)emb|CAD58628.1|7e-73SUI1 protein [Coffea arabica]
JMFN002E12Sequence576002445 (16)emb|CAD58628.1|3e-71SUI1 protein [Coffea arabica]
JMFN008F18Sequence625002445 (16)emb|CAD58628.1|3e-71SUI1 protein [Coffea arabica]
JMFN015I13Sequence627002445 (16)emb|CAD58628.1|1e-72SUI1 protein [Coffea arabica]
JMFN017I14Sequence627002445 (16)emb|CAD58628.1|9e-73SUI1 protein [Coffea arabica]
JMFN030B01Sequence616002445 (16)emb|CAD58628.1|7e-73SUI1 protein [Coffea arabica]
JMFN030I06Sequence512002445 (16)ref|XP_007021023.1|4e-24Translation initiation factor SUI1 family protein, putative [Theobroma cacao] g
JMFN034B22Sequence638002445 (16)emb|CAD58628.1|1e-72SUI1 protein [Coffea arabica]
JMFN039I08Sequence625002445 (16)emb|CAD58628.1|1e-72SUI1 protein [Coffea arabica]
JMSF047M23Sequence685002445 (16)emb|CAD58628.1|2e-72SUI1 protein [Coffea arabica]637002445 (16)emb|CAD58628.1|1e-72SUI1 protein [Coffea arabica]

Contig 2445 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002445============================================ 687         
  25  ---------------------------------------------------------------------------------->JMFF001M14                   
            <-----------------------------------------------------------------------------------------rJMFF001M14  
  45 -------------------------------------------------------------------------->JMSF047M23                            
     <--------------------------------------------------------------------------------------------rJMSF047M23  
 192                           -------------------------------------------------->JMFF015A23                          
                               <-----------------------------------------------------------------------rJMFF015A23

The following clones don't have the opposite end in this pair.

       ------------------------------------------------------------------------------------------->JMFN039I08-        
            ------------------------------------------------------------------------------------------>JMFN008F18-    
                    -------------------------------------------------------------------->JMFN030I06-                  
       ------------------------------------------------------------------------------------------->JMFN017I14-        
                               --------------------------------------------->JMFF034P22-                              
             ------------------------------------------------------------------------------------------->JMFN015I13-  
       -------------------------------------------------------------------------------------------->JMFN034B22-       
      ------------------------------------------------------------------------------------------->JMFN001A05-         
                    <-----------------------------------------------------------------------------------JMFN002E12-   
       ------------------------------------------------------------------------------------------>JMFN030B01-