List of clones in pair P012625.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G22Sequence350004720 (34)ref|XP_004143295.1|2e-64PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 675004720 (34)ref|XP_004143295.1|4e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF004H10Sequence612004720 (34)ref|XP_004143295.1|2e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 732004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF010J01Sequence516004720 (34)gb|AFK40850.1|9e-78unknown [Medicago truncatula] gb|KEH24091.1| 60S ribosomal protein L24-2 [Medica725004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF018O04Sequence511004720 (34)gb|AFK40850.1|8e-78unknown [Medicago truncatula] gb|KEH24091.1| 60S ribosomal protein L24-2 [Medica728004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF019B24Sequence554004720 (34)ref|XP_004143295.1|3e-66PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 675004720 (34)ref|XP_004143295.1|1e-65PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF028H13Sequence520004720 (34)ref|XP_002881455.1|7e-78RPL24A [Arabidopsis lyrata subsp. lyrata] ref|XP_006295128.1| hypothetical prote721004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF031G08Sequence571004720 (34)ref|XP_004143295.1|3e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 672004720 (34)ref|XP_004143295.1|6e-64PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFF048F02Sequence384004720 (34)ref|XP_004143295.1|1e-70PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 385004720 (34)
JMFN004F19Sequence620004720 (34)ref|XP_004143295.1|2e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFN014O14Sequence615004720 (34)ref|XP_004143295.1|1e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFN025G07Sequence631004720 (34)ref|XP_008442779.1|9e-71PREDICTED: 60S ribosomal protein L24-like [Cucumis melo]
JMFN036I20Sequence623004720 (34)ref|XP_004143295.1|1e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMFN042C18Sequence616004720 (34)ref|XP_004143295.1|1e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF010C04Sequence329004720 (34)ref|XP_004143295.1|4e-59PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 667004720 (34)ref|XP_004143295.1|4e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF010C12Sequence263004720 (34)ref|XP_004143295.1|4e-43PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 704004720 (34)ref|XP_004143295.1|6e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF013O03Sequence432004720 (34)ref|XP_004143295.1|4e-82PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 697004720 (34)ref|XP_004143295.1|6e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF017O03Sequence621004720 (34)gb|AFK40850.1|3e-46unknown [Medicago truncatula] gb|KEH24091.1| 60S ribosomal protein L24-2 [Medica
JMSF029N15Sequence661004720 (34)ref|XP_004143295.1|4e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 718004720 (34)ref|XP_004143295.1|7e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF034A04Sequence724004720 (34)ref|XP_004143295.1|2e-77PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 704004720 (34)ref|XP_004143295.1|8e-78PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|
JMSF046C21Sequence722004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1| 729004720 (34)ref|XP_004143295.1|8e-73PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] ref|XP_004168617.1|

Contig 4720 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004720============================================ 836         
  97       ------------------------------------------------------------->JMFF010J01                                   
            <--------------------------------------------------------------------------------------rJMFF010J01  
  97       ------------------------------------------------------------->JMFF028H13                                   
             <--------------------------------------------------------------------------------------rJMFF028H13  
 101        -------------------------------------------------------------------->JMFF031G08                           
                    <-------------------------------------------------------------------------------rJMFF031G08  
 101        ------------------------------------------------------------------------->JMFF004H10                      
            <---------------------------------------------------------------------------------------rJMFF004H10  
 102        ------------------------------------------------------------>JMFF018O04                                   
            <---------------------------------------------------------------------------------------rJMFF018O04  
 105       -------------------------------------------------------------------------------------->JMSF034A04          
              <------------------------------------------------------------------------------------rJMSF034A04  
 107              -------------------------------------->JMFF048F02                                                   
                                                          <----------------------------------------------rJMFF048F02  
 112        -------------------------------------------------------------------------------------->JMSF046C21         
            <--------------------------------------------------------------------------------------rJMSF046C21  
 115       ------------------------------------------------------------------------------>JMSF029N15                  
           <-------------------------------------------------------------------------------------rJMSF029N15  
 126        ------------------------------>JMSF010C12                                                                 
            <------------------------------------------------------------------------------------rJMSF010C12  
 150       --------------------------------------------------->JMSF013O03                                             
           <---------------------------------------------------------------------------------rJMSF013O03  
 164        -------------------------------------->JMSF010C04                                                         
            <-------------------------------------------------------------------------------rJMSF010C04  
 165        ---------------------------------------->JMFF004G22                                                       
            <-------------------------------------------------------------------------------rJMFF004G22  
 173                --------------------------------------------------------------->JMFF019B24                        
                    <------------------------------------------------------------------------------rJMFF019B24

The following clones don't have the opposite end in this pair.

              ------------------------------------------------------------------------->JMFN042C18-                   
             -------------------------------------------------------------------------->JMFN036I20-                   
     ----------------------------------------------------------------->JMFN025G07-                                    
                ------------------------------------------------------------------------>JMFN004F19-                  
              ------------------------------------------------------------------------->JMFN014O14-                   
                     <--------------------------------------------------------------------------rJMSF017O03-