| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF014J12 | Sequence | 231 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 2e-29 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | 782 | 000168 (13) | ref|XP_006340658.1| | 6e-148 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r |
| JMFF029M18 | Sequence | 504 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 1e-97 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | 687 | 000168 (13) | ref|XP_006340658.1| | 4e-121 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r |
| JMFF037I10 | Sequence | 489 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 5e-93 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | |||||
| JMFF048O22 | Sequence | 363 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 6e-61 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | |||||
| JMFN005H01 | Sequence | 616 | 000168 (13) | ref|XP_006340658.1| | 1e-126 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r | |||||
| JMFN011I21 | Sequence | 633 | 000168 (13) | ref|XP_006340658.1| | 6e-132 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r | |||||
| JMFN014E15 | Sequence | 641 | 000168 (13) | ref|XP_006340658.1| | 8e-134 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r | |||||
| JMFN025M24 | Sequence | 639 | 000168 (13) | ref|XP_006340658.1| | 7e-138 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r | |||||
| JMFN030G07 | Sequence | 611 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 2e-142 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | |||||
| JMSF027P05 | Sequence | 709 | 000168 (13) | sp|O82531.1|PSB1_PETHY | 1e-146 | RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S proteasome alph | 757 | 000168 (13) | ref|XP_006340658.1| | 1e-155 | PREDICTED: proteasome subunit beta type-1-like isoform X1 [Solanum tuberosum] r |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig000168============================================ 890 1 -------------------------------------------------------->JMFF029M18 <----------------------------------------------------------------------------rJMFF029M18 11 ------------------------->JMFF014J12 <---------------------------------------------------------------------------------------rJMFF014J12 71 ----------------------------------------------------------------------------->JMSF027P05 <-----------------------------------------------------------------------------------rJMSF027P05
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------->JMFN005H01- ---------------------------------------------------------------------->JMFN011I21- --------------------------------------->JMFF048O22- -------------------------------------------------------------------->JMFN030G07- ----------------------------------------------------->JMFF037I10- ----------------------------------------------------------------------->JMFN014E15- ----------------------------------------------------------------------->JMFN025M24-