clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010M20 | Sequence | 571 | 003242 (13) | ref|XP_010313515.1| | 7e-54 | PREDICTED: serine/arginine-rich splicing factor RS41 isoform X2 [Solanum lycope | 784 | 003242 (13) | ref|XP_009600304.1| | 2e-10 | PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X3 [Nicotiana |
JMFF014A03 | Sequence | 649 | 003242 (13) | ref|XP_011076231.1| | 2e-93 | PREDICTED: serine/arginine-rich splicing factor RS40 isoform X1 [Sesamum indicu | 742 | 003242 (13) | ref|XP_009600304.1| | 6e-14 | PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X3 [Nicotiana |
JMFF038L17 | Sequence | 588 | 003242 (13) | ref|XP_011076231.1| | 2e-77 | PREDICTED: serine/arginine-rich splicing factor RS40 isoform X1 [Sesamum indicu | 775 | 003242 (13) | ref|XP_009600304.1| | 3e-06 | PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X3 [Nicotiana |
JMFF039G21 | Sequence | 573 | 003242 (13) | ref|XP_011076232.1| | 3e-45 | PREDICTED: serine/arginine-rich splicing factor RS40 isoform X2 [Sesamum indicu | 750 | 003242 (13) | ref|XP_009600304.1| | 5e-04 | PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X3 [Nicotiana |
JMFF041O17 | Sequence | 638 | 003242 (13) | ref|XP_011076231.1| | 1e-78 | PREDICTED: serine/arginine-rich splicing factor RS40 isoform X1 [Sesamum indicu | 564 | 003242 (13) | |||
JMFF050G01 | Sequence | 627 | 003242 (13) | ref|XP_011076231.1| | 1e-87 | PREDICTED: serine/arginine-rich splicing factor RS40 isoform X1 [Sesamum indicu | 652 | 003242 (13) | ref|XP_009600304.1| | 2e-06 | PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X3 [Nicotiana |
JMSF006K14 | Sequence | 421 | 003242 (13) | emb|CBI31840.3| | 8e-17 | unnamed protein product [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003242============================================1634 8 -------------------------------------->JMFF041O17 <----------------------------------rJMFF041O17 20 ----------------------------------->JMFF038L17 <----------------------------------------------rJMFF038L17 159 ------------------------------------->JMFF050G01 <------------------------------------rJMFF050G01 183 --------------------------------------->JMFF014A03 <--------------------------------------------rJMFF014A03 419 ---------------------------------->JMFF010M20 <----------------------------------------------rJMFF010M20 419 ---------------------------------->JMFF039G21 <-------------------------------------------rJMFF039G21
The following clones don't have the opposite end in this pair.
------------>JMSF006K14-