| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF006G22 | Sequence | 505 | 001575 (28) | ref|XP_004247420.1| | 4e-70 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 799 | 001575 (28) | ref|XP_006444319.1| | 1e-14 | hypothetical protein CICLE_v10021764mg [Citrus clementina] ref|XP_006444321.1| h |
| JMFF013G01 | Sequence | 557 | 001575 (28) | ref|XP_004247420.1| | 5e-86 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 705 | 001575 (28) | |||
| JMFF013N10 | Sequence | 487 | 001575 (28) | ref|XP_004247420.1| | 1e-69 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 789 | 001575 (28) | gb|KDO87243.1| | 5e-13 | hypothetical protein CISIN_1g022301mg [Citrus sinensis] |
| JMFF019E19 | Sequence | 595 | 001575 (28) | ref|XP_004247420.1| | 3e-95 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 752 | 001575 (28) | ref|NP_001137034.1| | 3e-05 | uncharacterized protein LOC100217203 [Zea mays] ref|XP_008658199.1| PREDICTED: u |
| JMFF039A01 | Sequence | 607 | 001575 (28) | ref|XP_004247420.1| | 4e-94 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 740 | 001575 (28) | ref|NP_001137034.1| | 8e-07 | uncharacterized protein LOC100217203 [Zea mays] ref|XP_008658199.1| PREDICTED: u |
| JMFF039D07 | Sequence | 477 | 001575 (28) | ref|XP_004247420.1| | 1e-70 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 545 | 001575 (28) | |||
| JMFF039G06 | Sequence | 134 | 001575 (28) | ref|XP_009591648.1| | 1e-12 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X3 [Nicotiana tome | 655 | 001575 (28) | |||
| JMFS034E03 | Sequence | 594 | 001575 (28) | ref|XP_004247420.1| | 5e-98 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | |||||
| JMFS162H07 | Sequence | 617 | 001575 (28) | ref|XP_004247420.1| | 4e-69 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | |||||
| JMSF006E13 | Sequence | 277 | 001575 (28) | gb|KDO87243.1| | 8e-35 | hypothetical protein CISIN_1g022301mg [Citrus sinensis] | 469 | 001575 (28) | |||
| JMSF012H12 | Sequence | 494 | 001575 (28) | ref|XP_004247420.1| | 8e-72 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 757 | 001575 (28) | ref|XP_006444319.1| | 3e-13 | hypothetical protein CICLE_v10021764mg [Citrus clementina] ref|XP_006444321.1| h |
| JMSF037P07 | Sequence | 161 | 001575 (28) | emb|CAN80749.1| | 5e-21 | hypothetical protein VITISV_040486 [Vitis vinifera] | 177 | 001575 (28) | |||
| JMSF048B23 | Sequence | 674 | 001575 (28) | ref|XP_004247420.1| | 2e-97 | PREDICTED: serine/arginine-rich-splicing factor SR34 isoform X1 [Solanum lycope | 686 | 001575 (28) | |||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001575============================================1301 14 -------------------------------------->JMFF006G22 <------------------------------------------------------------rJMFF006G22 22 ------------------------------------------>JMFF013G01 <------------------------------------------------------rJMFF013G01 35 ------------------------------------>JMFF013N10 <-----------------------------------------------------------rJMFF013N10 38 ---------------------------------------------->JMFF039A01 <--------------------------------------------------------rJMFF039A01 44 --------------------------------------------->JMFF019E19 <--------------------------------------------------------rJMFF019E19 50 --------------------------------------------------->JMSF048B23 <----------------------------------------------------rJMSF048B23 55 --------->JMFF039G06 <-------------------------------------------------rJMFF039G06 56 ------------------------------------>JMFF039D07 <-----------------------------------------rJMFF039D07 57 ------------------------------------->JMSF012H12 <----------------------------------------------------------rJMSF012H12 145 ----------->JMSF037P07 <------------rJMSF037P07 534 ------------------->JMSF006E13 <-----------------------------------rJMSF006E13
The following clones don't have the opposite end in this pair.
----------------->JMSF004P15# ----------------------------------------------->JMFS162H07- <------------------------rJMSF004N13* ------------------------------------------------>JMSF027I01# ----------------------------------->JMSF021N10# --------------------------------------------->JMFS034E03-