| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF013A22 | Sequence | 526 | 001615 (13) | emb|CDP01320.1| | 2e-34 | unnamed protein product [Coffea canephora] | 786 | 001615 (13) | emb|CDP01320.1| | 2e-75 | unnamed protein product [Coffea canephora] |
| JMFF028O13 | Sequence | 667 | 001615 (13) | emb|CDP01320.1| | 4e-36 | unnamed protein product [Coffea canephora] | |||||
| JMFF036D06 | Sequence | 522 | 001615 (13) | emb|CDP01320.1| | 2e-34 | unnamed protein product [Coffea canephora] | 694 | 001615 (13) | emb|CDP01320.1| | 2e-45 | unnamed protein product [Coffea canephora] |
| JMFF047D22 | Sequence | 638 | 001615 (13) | emb|CDP01320.1| | 8e-48 | unnamed protein product [Coffea canephora] | 536 | 001615 (13) | ref|XP_010263513.1| | 74.3 | PREDICTED: uncharacterized protein LOC104601752 [Nelumbo nucifera] |
| JMFF048I17 | Sequence | 516 | 001615 (13) | emb|CDP01320.1| | 2e-30 | unnamed protein product [Coffea canephora] | 572 | 001615 (13) | emb|CDP01320.1| | 1e-21 | unnamed protein product [Coffea canephora] |
| JMFN020L21 | Sequence | 526 | 001615 (13) | ref|XP_010263513.1| | 74.3 | PREDICTED: uncharacterized protein LOC104601752 [Nelumbo nucifera] | |||||
| JMFS167F09 | Sequence | 620 | 001615 (13) | emb|CDP01320.1| | 6e-76 | unnamed protein product [Coffea canephora] | |||||
| JMSF034E05 | Sequence | 656 | 001615 (13) | ref|XP_009604889.1| | 180 | PREDICTED: uncharacterized protein LOC104099562 [Nicotiana tomentosiformis] | 716 | 001615 (13) | emb|CDP01320.1| | 8e-53 | unnamed protein product [Coffea canephora] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001615============================================1563 7 ---------------------------------------->JMFF047D22 <---------------------------------rJMFF047D22 34 -------------------------------->JMFF036D06 <-------------------------------------------rJMFF036D06 43 ----------------------------------------->JMSF034E05 <---------------------------------------------rJMSF034E05 47 -------------------------------->JMFF048I17 <-----------------------------------rJMFF048I17 68 --------------------------------->JMFF013A22 <-------------------------------------------------rJMFF013A22
The following clones don't have the opposite end in this pair.
--------------------------------->JMFN020L21- <-----------------------------------------rJMFF028O13- --------------------------------------->JMFS167F09-