clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005N04 | Sequence | 523 | 012231 (10) | emb|CDP02149.1| | 8e-34 | unnamed protein product [Coffea canephora] | 714 | 012231 (10) | ref|XP_011098519.1| | 174 | PREDICTED: uncharacterized protein LOC105177167 [Sesamum indicum] |
JMFF022K11 | Sequence | 538 | 012231 (10) | emb|CDP02149.1| | 2e-36 | unnamed protein product [Coffea canephora] | 714 | 012231 (10) | ref|XP_011098519.1| | 174 | PREDICTED: uncharacterized protein LOC105177167 [Sesamum indicum] |
JMFF047K12 | Sequence | 467 | 012231 (10) | emb|CDP02149.1| | 5e-21 | unnamed protein product [Coffea canephora] | 447 | 012231 (10) | ref|XP_011098519.1| | 117 | PREDICTED: uncharacterized protein LOC105177167 [Sesamum indicum] |
JMSF020N21 | Sequence | 704 | 012231 (10) | emb|CDP02149.1| | 4e-52 | unnamed protein product [Coffea canephora] | 726 | 012231 (10) | emb|CDP02149.1| | 2e-51 | unnamed protein product [Coffea canephora] |
JMSF038H22 | Sequence | 671 | 012231 (10) | emb|CDP02149.1| | 9e-52 | unnamed protein product [Coffea canephora] | 770 | 012231 (10) | emb|CDP02149.1| | 1e-50 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012231============================================ 891 4 --------------------------------------------------------->JMFF005N04 <-------------------------------------------------------------------------------rJMFF005N04 8 ----------------------------------------------------------->JMFF022K11 <-------------------------------------------------------------------------------rJMFF022K11 13 -------------------------------------------------------------------------->JMSF038H22 <-------------------------------------------------------------------------------------rJMSF038H22 37 ----------------------------------------------------------------------------->JMSF020N21 <--------------------------------------------------------------------------------rJMSF020N21 61 --------------------------------------------------->JMFF047K12 <----------------------------------------------rJMFF047K12
The following clones don't have the opposite end in this pair.