clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016A09 | Sequence | 622 | 003131 (5) | gb|KCW87025.1| | 7e-125 | hypothetical protein EUGRSUZ_B03574 [Eucalyptus grandis] | 775 | 003131 (5) | gb|KCW50320.1| | 1e-137 | hypothetical protein EUGRSUZ_J00099 [Eucalyptus grandis] |
JMFN003P13 | Sequence | 549 | 003131 (5) | ref|XP_008245892.1| | 4e-82 | PREDICTED: 60S ribosomal protein L10 [Prunus mume] | |||||
JMSF020J07 | Sequence | 659 | 003131 (5) | ref|XP_008782699.1| | 4e-141 | PREDICTED: 60S ribosomal protein L10 [Phoenix dactylifera] | 773 | 003131 (5) | gb|KCW50320.1| | 3e-138 | hypothetical protein EUGRSUZ_J00099 [Eucalyptus grandis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003131============================================ 862 1 ----------------------------------------------------------------------->JMFF016A09 <-----------------------------------------------------------------------------------------rJMFF016A09 214 ----------------------------------------------------------------------->JMSF020J07 <----------------------------------------------------------------------rJMSF020J07
The following clones don't have the opposite end in this pair.
--------------------------------------------->JMFN003P13-