clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002K13 | Sequence | 529 | 010273 (11) | ref|XP_004247113.1| | 2e-35 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] | 742 | 010273 (11) | ref|XP_004247113.1| | 3e-34 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMFF003M07 | Sequence | 322 | 010273 (11) | ref|XP_011080147.1| | 1e-09 | PREDICTED: tetraspanin-18 [Sesamum indicum] | |||||
JMFF003N07 | Sequence | 557 | 010273 (11) | ref|XP_011080147.1| | 5e-36 | PREDICTED: tetraspanin-18 [Sesamum indicum] | 771 | 010273 (11) | ref|XP_004247113.1| | 1e-37 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMFF011L03 | Sequence | 490 | 010273 (11) | ref|XP_004247113.1| | 6e-48 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] | 743 | 010273 (11) | ref|XP_004247113.1| | 3e-34 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMFF034B17 | Sequence | 578 | 010273 (11) | ref|XP_004247113.1| | 5e-36 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] | 737 | 010273 (11) | ref|XP_004247113.1| | 3e-35 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
JMFF036L02 | Sequence | 602 | 010273 (11) | ref|XP_011080147.1| | 8e-28 | PREDICTED: tetraspanin-18 [Sesamum indicum] | 749 | 010273 (11) | ref|XP_004247113.1| | 1e-40 | PREDICTED: tetraspanin-20 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010273============================================1196 29 ------------------------------------------------->JMFF036L02 <-------------------------------------------------------------rJMFF036L02 53 ---------------------------------------------->JMFF003N07 <---------------------------------------------------------------rJMFF003N07 467 ---------------------------------------->JMFF011L03 <------------------------------------------------------------rJMFF011L03 467 ------------------------------------------->JMFF002K13 <------------------------------------------------------------rJMFF002K13 468 ----------------------------------------------->JMFF034B17 <------------------------------------------------------------rJMFF034B17
The following clones don't have the opposite end in this pair.
-------------------------->JMFF003M07-