clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014E11 | Sequence | 543 | 002364 (30) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFF016F08 | Sequence | 329 | 002364 (30) | ref|XP_009622218.1| | 2e-25 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN004L20 | Sequence | 526 | 002364 (30) | ref|XP_009622218.1| | 3e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN007J03 | Sequence | 619 | 002364 (30) | ref|XP_009622218.1| | 4e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN010J13 | Sequence | 622 | 002364 (30) | ref|XP_009622218.1| | 3e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN014D23 | Sequence | 623 | 002364 (30) | ref|XP_009622218.1| | 3e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN014N16 | Sequence | 611 | 002364 (30) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN015F04 | Sequence | 610 | 002364 (30) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN016A02 | Sequence | 611 | 002364 (30) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN016C16 | Sequence | 549 | 002364 (30) | ref|XP_009622218.1| | 2e-57 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN017L10 | Sequence | 565 | 002364 (30) | ref|XP_009622218.1| | 3e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN028P09 | Sequence | 659 | 002364 (30) | ref|XP_009622218.1| | 4e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN029G16 | Sequence | 674 | 002364 (30) | ref|XP_009760524.1| | 5e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana sylvestris] | |||||
JMFN034F15 | Sequence | 613 | 002364 (30) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN036O16 | Sequence | 586 | 002364 (30) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN037L09 | Sequence | 590 | 002364 (30) | ref|XP_009622218.1| | 5e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN038G20 | Sequence | 581 | 002364 (30) | ref|XP_009622218.1| | 5e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN042P02 | Sequence | 563 | 002364 (30) | ref|XP_009622218.1| | 2e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMFN043N14 | Sequence | 217 | 002364 (30) | ||||||||
JMFN044H12 | Sequence | 623 | 002364 (30) | ref|XP_009622218.1| | 4e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | |||||
JMSF020K18 | Sequence | 675 | 002364 (30) | ref|XP_009622218.1| | 5e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | 723 | 002364 (30) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] |
JMSF037I16 | Sequence | 664 | 002364 (30) | ref|XP_009622218.1| | 3e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] | 694 | 002364 (30) | ref|XP_009622218.1| | 6e-58 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002364============================================ 725 1 ------------------------------------------------------------------------------------------->JMSF037I16 <-----------------------------------------------------------------------------------------------rJMSF037I16 6 -------------------------------------------------------------------------------------------->JMSF020K18 <--------------------------------------------------------------------------------------------------rJMSF020K18
The following clones don't have the opposite end in this pair.
<----------------------------------------------------------------------------------rJMSF038F08* --------------------------------------------------------------------------->JMFN016C16- --------------------------------------------------------------------------->JMFF010J14* ------------------------------------------------------------------------------->JMFN038G20- ------------------------------------------------------------------------------------>JMFN014N16- ------------------------------------------------------------------------------------->JMFN014D23- ------------------------------------------------------------------------->JMFF001M09* ----------------------------------------------------------------------------------->JMFN015F04- ----------------------------------------------------------------------------->JMFN042P02- --------------------------------------------------------------------------------->JMFN037L09- ----------------------------------------------------------------------------->JMFN017L10- ------------------------------------------------------------------------------------->JMFN010J13- -------------------------------------------------------------------------------->JMFN036O16- -------------------------------------------------------------------------------------->JMFF050K13* --------------------------------------------------------------------->JMFF035I18* ------------------------------------------------------------------------------------>JMFN016A02- ------------------------------------------------------------------------------------------>JMFN028P09- ----------------------------------------------------------------------------------------->JMFF041N08* ------------------------------------------------------------------------------------->JMFN007J03- ------------------------------------------------------------------------------------>JMFN034F15- --------------------------------------------------------------------->JMFN029G16- ----------------------------------------------------------------------->JMFN004L20- ------------------------------------------------------------------------------------->JMFN044H12- -------------------------------------------------------------------------->JMFF014E11- <---------------------------------------------rJMFF016F08- ----------------------------->JMFN043N14-