clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001O04 | Sequence | 528 | 012923 (18) | ref|XP_009766381.1| | 5e-63 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 662 | 012923 (18) | ref|XP_009766381.1| | 3e-73 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF018K10 | Sequence | 529 | 012923 (18) | ref|XP_009766381.1| | 1e-29 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 765 | 012923 (18) | ref|XP_009766381.1| | 4e-73 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF022M07 | Sequence | 435 | 012923 (18) | ref|XP_009766381.1| | 2e-10 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 771 | 012923 (18) | ref|XP_009766381.1| | 5e-74 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF029N16 | Sequence | 617 | 012923 (18) | ref|XP_009766381.1| | 1e-33 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | |||||
JMFF035A01 | Sequence | 589 | 012923 (18) | ref|XP_009766381.1| | 8e-42 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 748 | 012923 (18) | ref|XP_009766381.1| | 4e-74 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF040I16 | Sequence | 590 | 012923 (18) | ref|XP_009766381.1| | 3e-29 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 766 | 012923 (18) | ref|XP_009766381.1| | 5e-74 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF042C10 | Sequence | 653 | 012923 (18) | ref|XP_009766381.1| | 3e-53 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 590 | 012923 (18) | ref|XP_009766381.1| | 1e-58 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri |
JMFF043D17 | Sequence | 637 | 012923 (18) | ref|XP_009766381.1| | 4e-53 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 522 | 012923 (18) | ref|XP_004247604.1| | 2e-51 | PREDICTED: early light-induced protein 1, chloroplastic isoform X1 [Solanum lyc |
JMFF049L08 | Sequence | 457 | 012923 (18) | ref|XP_006363471.1| | 3e-13 | PREDICTED: early light-induced protein, chloroplastic-like [Solanum tuberosum] | |||||
JMFF050D07 | Sequence | 585 | 012923 (18) | ref|XP_009766381.1| | 2e-37 | PREDICTED: early light-induced protein, chloroplastic-like [Nicotiana sylvestri | 512 | 012923 (18) | ref|XP_004247604.1| | 4e-56 | PREDICTED: early light-induced protein 1, chloroplastic isoform X1 [Solanum lyc |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012923============================================ 948 12 ------------------------------------------------------------------>JMFF043D17 <------------------------------------------------------rJMFF043D17 112 ----------------------------------------------------------->JMFF050D07 <--------------------------------------------------rJMFF050D07 115 -------------------------------------------------------------------->JMFF042C10 <-------------------------------------------------------------rJMFF042C10 123 ------------------------------------------------------------->JMFF035A01 <------------------------------------------------------------------------------rJMFF035A01 128 ------------------------------------------------------------->JMFF040I16 <--------------------------------------------------------------------------------rJMFF040I16 131 --------------------------------------------->JMFF022M07 <--------------------------------------------------------------------------------rJMFF022M07 133 ------------------------------------------------------->JMFF018K10 <--------------------------------------------------------------------------------rJMFF018K10 284 ------------------------------------------------------->JMFF001O04 <---------------------------------------------------------------------rJMFF001O04
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------->JMFF029N16- -------------------------------------->JMFF049L08-