clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017A05 | Sequence | 540 | 004152 (6) | ref|XP_009773786.1| | 5e-69 | PREDICTED: NAP1-related protein 2-like [Nicotiana sylvestris] | 772 | 004152 (6) | gb|KHN21849.1| | 3e-66 | Protein SET [Glycine soja] |
JMFF049C01 | Sequence | 519 | 004152 (6) | ref|XP_009773786.1| | 2e-64 | PREDICTED: NAP1-related protein 2-like [Nicotiana sylvestris] | 449 | 004152 (6) | gb|KJB06271.1| | 9e-07 | hypothetical protein B456_001G072000 [Gossypium raimondii] |
JMSF015G21 | Sequence | 437 | 004152 (6) | ref|XP_009773786.1| | 3e-59 | PREDICTED: NAP1-related protein 2-like [Nicotiana sylvestris] | 666 | 004152 (6) | ref|XP_003523025.1| | 1e-41 | PREDICTED: NAP1-related protein 2 isoform X1 [Glycine max] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004152============================================1136 10 ------------------------------------------->JMFF049C01 <---------------------------------------rJMFF049C01 24 ----------------------------------------------->JMFF017A05 <------------------------------------------------------------------rJMFF017A05 80 ------------------------------------->JMSF015G21 <----------------------------------------------------------rJMSF015G21
The following clones don't have the opposite end in this pair.