clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF049N20 | Sequence | 551 | 010059 (19) | ref|XP_009614370.1| | 4e-61 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 442 | 010059 (19) | ref|XP_009772587.1| | 2e-31 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana sylvestris] |
JMFN012F13 | Sequence | 627 | 010059 (19) | ref|XP_009614370.1| | 4e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMFN014J14 | Sequence | 627 | 010059 (19) | ref|XP_009614370.1| | 2e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMFN016C14 | Sequence | 653 | 010059 (19) | ref|XP_009614370.1| | 6e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMFN017G17 | Sequence | 605 | 010059 (19) | ref|XP_009614370.1| | 1e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMFN025P21 | Sequence | 621 | 010059 (19) | ref|XP_009614370.1| | 4e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMFN036K12 | Sequence | 617 | 010059 (19) | ref|XP_009614370.1| | 4e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMSF009J23 | Sequence | 287 | 010059 (19) | ref|XP_009614370.1| | 4e-17 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 692 | 010059 (19) | ref|XP_009614370.1| | 9e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo |
JMSF012P19 | Sequence | 262 | 010059 (19) | ref|XP_009614370.1| | 1e-11 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 632 | 010059 (19) | ref|XP_009614370.1| | 5e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo |
JMSF039F17 | Sequence | 663 | 010059 (19) | ref|XP_009614370.1| | 7e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | |||||
JMSF041E10 | Sequence | 743 | 010059 (19) | ref|XP_009614370.1| | 2e-66 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 729 | 010059 (19) | ref|XP_009614370.1| | 6e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo |
JMSF047J06 | Sequence | 653 | 010059 (19) | ref|XP_009614370.1| | 6e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 717 | 010059 (19) | ref|XP_009614370.1| | 1e-66 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo |
JMSF052E23 | Sequence | 647 | 010059 (19) | ref|XP_009614370.1| | 5e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo | 665 | 010059 (19) | ref|XP_009614370.1| | 7e-67 | PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Nicotiana tomentosifo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010059============================================ 716 14 ---------------------------------------------------------------------------->JMSF041E10 <---------------------------------------------------------------------------------------------------rJMSF041E10 15 ------------------------------------------------------------------------------------------>JMSF047J06 <-------------------------------------------------------------------------------------------------rJMSF047J06 43 --------------------------------------->JMSF009J23 <---------------------------------------------------------------------------------------------rJMSF009J23 52 ----------------------------------------------------------------------------------------->JMSF052E23 <--------------------------------------------------------------------------------------------rJMSF052E23 54 ---------------------------------------------------------------------------->JMFF049N20 <-------------------------------------------------------------rJMFF049N20 82 ------------------------------------>JMSF012P19 <----------------------------------------------------------------------------------------rJMSF012P19
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------------------------->JMSF039F17- --------------------------------------------------------------------------------------->JMFN012F13- ------------------------------------------------------------------------------------>JMFN017G17- ------------------------------------------------------------------------------------->JMFN036K12- -------------------------------------------------------------------------------------->JMFN025P21- ------------------------------------------------------------------------------------------>JMFN016C14- --------------------------------------------------------------------------------------->JMFN014J14-