List of clones in pair P012197.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004E23Sequence480004337 (16)gb|KGN66469.1|9e-79hypothetical protein Csa_1G612925 [Cucumis sativus]624004337 (16)gb|KGN66469.1|6e-78hypothetical protein Csa_1G612925 [Cucumis sativus]
JMFF022H13Sequence445004337 (16)gb|KJB67030.1|9e-75hypothetical protein B456_010G171000 [Gossypium raimondii]661004337 (16)gb|KJB67030.1|3e-77hypothetical protein B456_010G171000 [Gossypium raimondii]
JMFN003J15Sequence616004337 (16)gb|AAV65112.1|1e-77histone 3 [Camellia sinensis]
JMFN004M13Sequence590004337 (16)gb|AAV65112.1|1e-77histone 3 [Camellia sinensis]
JMFN016O15Sequence603004337 (16)gb|KGN66469.1|4e-78hypothetical protein Csa_1G612925 [Cucumis sativus]
JMFN017F07Sequence610004337 (16)gb|KGN66469.1|1e-76hypothetical protein Csa_1G612925 [Cucumis sativus]
JMFN032K03Sequence600004337 (16)gb|KGN66469.1|7e-79hypothetical protein Csa_1G612925 [Cucumis sativus]
JMFN035B24Sequence618004337 (16)gb|AAV65112.1|2e-77histone 3 [Camellia sinensis]
JMFN035P01Sequence599004337 (16)gb|KGN66469.1|4e-78hypothetical protein Csa_1G612925 [Cucumis sativus]
JMSF005N08Sequence242004337 (16)gb|KGN66469.1|6e-40hypothetical protein Csa_1G612925 [Cucumis sativus]
JMSF038M23Sequence657004337 (16)gb|KGN66469.1|9e-78hypothetical protein Csa_1G612925 [Cucumis sativus]606004337 (16)gb|KGN66469.1|5e-78hypothetical protein Csa_1G612925 [Cucumis sativus]
JMSF042P20Sequence586004337 (16)gb|AAV65112.1|5e-69histone 3 [Camellia sinensis]539004337 (16)gb|AAV65112.1|3e-69histone 3 [Camellia sinensis]

Contig 4337 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004337============================================ 665         
 122                ------------------------------------------------------->JMSF042P20                                
                    <---------------------------------------------------------------------------------rJMSF042P20  
 126  ----------------------------------------------------------------------->JMFF004E23                              
      <--------------------------------------------------------------------------------rJMFF004E23  
 126  -------------------------------------------------------------------------------->JMSF038M23                     
     <---------------------------------------------------------------------------------rJMSF038M23  
 258           -------------------------------------------------------->JMFF022H13                                    
               <------------------------------------------------------------rJMFF022H13

The following clones don't have the opposite end in this pair.

            ----------------------------------------------------------------------------------------->JMFN035P01-     
             ------------------------------->JMSF005N08-                                                              
              ------------------------------------------------------------->JMFN035B24-                               
            ----------------------------------------------------------------------------------------->JMFN032K03-     
             ------------------------------------------------------------------------------------------->JMFN017F07-  
              ------------------------------------------------------------->JMFN003J15-                               
             ------------------------------------------------------------------------------------------>JMFN016O15-   
              ---------------------------------------------------------------------------------------->JMFN004M13-