clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010C12 | Sequence | 479 | 010330 (16) | ref|XP_009596868.1| | 8e-11 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | |||||
JMFF026J16 | Sequence | 553 | 010330 (16) | ref|XP_009596868.1| | 8e-31 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | |||||
JMFF042J19 | Sequence | 648 | 010330 (16) | ref|XP_009596868.1| | 1e-52 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | |||||
JMFF049K20 | Sequence | 631 | 010330 (16) | ref|XP_009596868.1| | 8e-10 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | 621 | 010330 (16) | ref|XP_004158552.1| | 3e-74 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic-like [Cucumis s |
JMFS041A12 | Sequence | 625 | 010330 (16) | ref|XP_009596868.1| | 2e-54 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | |||||
JMSF018H14 | Sequence | 535 | 010330 (16) | ref|XP_009596868.1| | 3e-30 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | 228 | 010330 (16) | |||
JMSF032J06 | Sequence | 693 | 010330 (16) | ref|XP_009596868.1| | 2e-60 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | 160 | 010330 (16) | |||
JMSF035G11 | Sequence | 669 | 010330 (16) | gb|KJB59243.1| | 1e-121 | hypothetical protein B456_009G246200 [Gossypium raimondii] | 126 | 010330 (16) | |||
JMSF038B11 | Sequence | 671 | 010330 (16) | ref|XP_009596868.1| | 1e-59 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome | 256 | 010330 (16) | |||
JMSF046E22 | Sequence | 371 | 010330 (16) | gb|KDP32813.1| | 6e-28 | hypothetical protein JCGZ_12105 [Jatropha curcas] | |||||
JMSF051K08 | Sequence | 733 | 010330 (16) | ref|XP_009596868.1| | 9e-73 | PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Nicotiana tome |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010330============================================2015 145 ------------------------------>JMFF049K20 <----------------------------rJMFF049K20 170 -------------------------------->JMSF038B11 <-----------rJMSF038B11 209 -------------------------->JMSF018H14 <---------rJMSF018H14 276 --------------------------------->JMSF032J06 <-----rJMSF032J06 921 -------------------------------->JMSF035G11 <-----rJMSF035G11
The following clones don't have the opposite end in this pair.
----------------------------------->JMSF051K08- ---------------->JMSF046E22- ------------------------------->JMFF042J19- ----------------------->JMFF010C12- -------------------------->JMFF026J16- ------------------------------>JMFS041A12-