List of clones in pair P012066.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K06Sequence545007407 (31)ref|XP_011092178.1|1e-71PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se566007407 (31)ref|XP_007207335.1|7e-52hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMFF030A18Sequence488007407 (31)ref|XP_011088025.1|2e-17PREDICTED: uncharacterized protein At3g49720-like [Sesamum indicum]266007407 (31)
JMFF030J04Sequence575007407 (31)ref|XP_009780849.1|9e-82PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni267007407 (31)
JMFF044D20Sequence645007407 (31)ref|XP_009619213.1|4e-101PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni559007407 (31)ref|XP_007207335.1|2e-75hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMFF049B15Sequence627007407 (31)ref|XP_009619213.1|1e-90PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni605007407 (31)ref|XP_007207335.1|9e-87hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMSF001M21Sequence228007407 (31)568007407 (31)ref|XP_007207335.1|2e-30hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMSF002M06Sequence372007407 (31)ref|XP_011092178.1|4e-33PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se571007407 (31)ref|XP_007207335.1|1e-39hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMSF006I14Sequence430007407 (31)ref|XP_011092178.1|2e-45PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se
JMSF010C02Sequence339007407 (31)ref|XP_004302291.1|9e-25PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Fr595007407 (31)ref|XP_008350588.1|9e-46PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-lik
JMSF010K24Sequence311007407 (31)ref|XP_004302291.1|8e-17PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Fr
JMSF019L13Sequence246007407 (31)ref|XP_011092178.1|3e-04PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se568007407 (31)ref|XP_007207335.1|1e-40hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMSF026K05Sequence633007407 (31)ref|XP_009619213.1|2e-95PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni
JMSF031B06Sequence635007407 (31)ref|XP_009619213.1|2e-95PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni606007407 (31)ref|XP_007207335.1|2e-51hypothetical protein PRUPE_ppa007071mg [Prunus persica] gb|EMJ08534.1| hypotheti
JMSF042O21Sequence762007407 (31)ref|XP_009619213.1|4e-129PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni342007407 (31)ref|XP_004146391.1|4e-13PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-lik
JMSF052C08Sequence618007407 (31)ref|XP_009619213.1|5e-96PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ni769007407 (31)ref|XP_008350588.1|1e-67PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-lik

Contig 7407 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007407============================================1740         
  27 --------------------------->JMFF030A18                                                                           
                                                                                          <-------------rJMFF030A18  
 333                    ----------------------------------->JMFF049B15                                                
                                                                      <----------------------------------rJMFF049B15  
 350                     ------------------------------------>JMFF044D20                                              
                                                                         <-------------------------------rJMFF044D20  
 359                    -------------------------------->JMFF030J04                                                   
                                                                                         <-------------rJMFF030J04  
 360                    ------------------------------>JMFF001K06                                                     
                                                                         <------------------------------rJMFF001K06  
 367                    ------------------------------------------->JMSF042O21                                        
                                                                                     <-----------------rJMSF042O21  
 368                    ----------------------------------->JMSF031B06                                                
                                                                    <----------------------------------rJMSF031B06  
 376                    ------------------>JMSF010C02                                                                 
                                                                    <---------------------------------rJMSF010C02  
 377                    ------------->JMSF019L13                                                                      
                                                                      <--------------------------------rJMSF019L13  
 378                    -------------------->JMSF002M06                                                               
                                                                      <--------------------------------rJMSF002M06  
 385                     ---------------------------------->JMSF052C08                                                
                                                           <-------------------------------------------rJMSF052C08  
 394                    ------------>JMSF001M21                                                                       
                                                                      <-------------------------------rJMSF001M21

The following clones don't have the opposite end in this pair.

                        ----------------->JMSF004M10*                                                                 
                                                                 <-------------------------------------rJMSF027I06*   
                        ------------------------>JMSF006I14-                                                          
                        ----------------->JMSF001I01#                                                                 
                        ----------------------------------->JMSF026K05-                                               
                          ------------------------------------->JMSF020C02*                                           
                        ---------------->JMSF010K24-