List of clones in pair P012063.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002E08Sequence600001572 (36)ref|XP_002268645.1|8e-62PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
JMFF005O03Sequence564001572 (36)ref|XP_002268645.1|1e-56PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]770001572 (36)ref|NP_001238374.1|4e-11460S acidic ribosomal protein P0 [Glycine max] sp|P50346.1|RLA0_SOYBN RecName: Fu
JMFF005O04Sequence283001572 (36)sp|P29764.1|RLA0_OXYRB3e-07RecName: Full=60S acidic ribosomal protein P0; AltName: Full=Light-induced 34 k570001572 (36)emb|CDP14047.1|8e-63unnamed protein product [Coffea canephora]
JMFF009M11Sequence553001572 (36)ref|XP_002268645.1|1e-56PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
JMFF029M02Sequence464001572 (36)ref|XP_002268645.1|6e-52PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]716001572 (36)emb|CDP14047.1|6e-74unnamed protein product [Coffea canephora]
JMFF036G09Sequence560001572 (36)ref|XP_002268645.1|3e-73PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]717001572 (36)emb|CDP14047.1|1e-72unnamed protein product [Coffea canephora]
JMFF036M11Sequence565001572 (36)ref|XP_002268645.1|1e-56PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]716001572 (36)emb|CDP14047.1|6e-74unnamed protein product [Coffea canephora]
JMFF042H05Sequence627001572 (36)ref|XP_002268645.1|3e-88PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]661001572 (36)emb|CDP14047.1|3e-40unnamed protein product [Coffea canephora]
JMFF045A08Sequence649001572 (36)ref|XP_002268645.1|4e-88PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]660001572 (36)emb|CDP14047.1|9e-44unnamed protein product [Coffea canephora]
JMFF045J18Sequence574001572 (36)ref|XP_002268645.1|2e-71PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]320001572 (36)
JMFF050G13Sequence627001572 (36)ref|XP_002268645.1|2e-89PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]524001572 (36)emb|CDP14047.1|2e-30unnamed protein product [Coffea canephora]
JMFN005E02Sequence430001572 (36)emb|CDP14047.1|4e-29unnamed protein product [Coffea canephora]
JMFN017H12Sequence627001572 (36)emb|CDP14047.1|9e-73unnamed protein product [Coffea canephora]
JMFS066D06Sequence627001572 (36)ref|XP_002268645.1|4e-97PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
JMFS082G05Sequence606001572 (36)ref|XP_002268645.1|2e-90PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
JMSF003O10Sequence278001572 (36)sp|P29764.1|RLA0_OXYRB6e-08RecName: Full=60S acidic ribosomal protein P0; AltName: Full=Light-induced 34 k787001572 (36)emb|CBI31491.3|5e-105unnamed protein product [Vitis vinifera]
JMSF010M22Sequence270001572 (36)sp|P29764.1|RLA0_OXYRB1e-06RecName: Full=60S acidic ribosomal protein P0; AltName: Full=Light-induced 34 k704001572 (36)emb|CDP14047.1|4e-78unnamed protein product [Coffea canephora]
JMSF011B09Sequence207001572 (36)760001572 (36)ref|NP_001238374.1|3e-10760S acidic ribosomal protein P0 [Glycine max] sp|P50346.1|RLA0_SOYBN RecName: Fu
JMSF023A17Sequence666001572 (36)ref|XP_002268645.1|9e-101PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]790001572 (36)ref|NP_001238374.1|2e-9060S acidic ribosomal protein P0 [Glycine max] sp|P50346.1|RLA0_SOYBN RecName: Fu
JMSF029N17Sequence601001572 (36)ref|XP_002268645.1|7e-84PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]661001572 (36)emb|CDP14047.1|3e-66unnamed protein product [Coffea canephora]
JMSF048M09Sequence680001572 (36)ref|XP_002268645.1|4e-104PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]734001572 (36)emb|CDP14047.1|1e-82unnamed protein product [Coffea canephora]

Contig 1572 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001572============================================1390         
   3 ------------------------------------------->JMFF042H05                                                           
                                                          <----------------------------------------------rJMFF042H05  
   9  --------------------------------------------->JMFF045A08                                                        
                                                          <-----------------------------------------------rJMFF045A08  
  45 -------------------------------------------->JMFF050G13                                                          
                                                                 <------------------------------------rJMFF050G13  
  61 --------------------------------------->JMFF036G09                                                               
                                                 <---------------------------------------------------rJMFF036G09  
  63 ---------------------------------------->JMFF036M11                                                              
                                                 <---------------------------------------------------rJMFF036M11  
  67  -------------------------------------->JMFF045J18                                                               
                                                                              <----------------------rJMFF045J18  
  69  -------------------------------->JMFF029M02                                                                     
                                                 <---------------------------------------------------rJMFF029M02  
  89 ------------------>JMSF010M22                                                                                    
                                                <--------------------------------------------------rJMSF010M22  
  89 ----------------------------------------------->JMSF023A17                                                       
                                          <--------------------------------------------------------rJMSF023A17  
  89 ------------------------------------------------>JMSF048M09                                                      
                                               <---------------------------------------------------rJMSF048M09  
  93 ------------------------------------------>JMSF029N17                                                            
                                                   <-----------------------------------------------rJMSF029N17  
 167 ------------------->JMFF005O04                                                                                   
                                                    <----------------------------------------rJMFF005O04  
 167 ------------------->JMSF003O10                                                                                   
                                      <------------------------------------------------------rJMSF003O10  
 175 -------------->JMSF011B09                                                                                        
                                       <-----------------------------------------------------rJMSF011B09  
 175 ---------------------------------------->JMFF005O03                                                              
                                     <-------------------------------------------------------rJMFF005O03

The following clones don't have the opposite end in this pair.

     ------------------------------------------>JMFF002E08-                                                           
       -------------------------------------------->JMFS066D06-                                                       
      ------------------------------------------->JMFS082G05-                                                         
                                           -------------------------------------------->JMFN017H12-                   
     --------------------------------------->JMFF009M11-                                                              
                                                                 ------------------------------>JMFN005E02-